CELL TYPE: Fibroblasts


Distribution of Fibroblasts in Tissues/Organs

Word Cloud of All Markers


Function



  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Fibroblasts.


  • Detail Marker Information in Datasets


    Dataset ID Species Tissue / Organ Cell cluster Cell type Experiment type Sample Marker gene Marker class Evidence
    PRJNA610520 (3.5dpf) Danio rerio caudal hematopoietic tissue 16 Fibroblasts baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000069093 (col2a1a) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) Danio rerio caudal hematopoietic tissue 14 Fibroblasts baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. ENSDARG00000069093 (col2a1a) marker DOI:10.1016/j.cell.2008.01.025
    PRJNA706197 (18hpf) Danio rerio embryo 8 Fibroblasts baseline 18hpf, FACS sorted sox10:nEOS cells ENSDARG00000036869 (tcf21) marker DOI:10.1016/j.celrep.2021.110140
    PRJNA797645 Gasterosteus aculeatus embryo 15 Fibroblasts baseline 70 hpf, whole embryo, untreatment ENSGACG00000010957 (tcf21) marker DOI:10.15252/embr.202152901
    PRJNA797645 Gasterosteus aculeatus embryo 15 Fibroblasts baseline 70 hpf, whole embryo, untreatment ENSGACG00000005143 (col1a1a) marker DOI:10.15252/embr.202152901
    PRJNA608912 (wt_unjuried) Danio rerio heart 2 Fibroblasts baseline 5mpf, wild type, uninjured ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_unjuried) Danio rerio heart 2 Fibroblasts baseline 5mpf, wild type, uninjured ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_2dpi) Danio rerio heart 3 Fibroblasts regeneration 5mpf, wild type, 2 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_2dpi) Danio rerio heart 3 Fibroblasts regeneration 5mpf, wild type, 2 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_2dpi) Danio rerio heart 7 Fibroblasts regeneration 5mpf, wild type, 2 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_2dpi) Danio rerio heart 7 Fibroblasts regeneration 5mpf, wild type, 2 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_7dpi) Danio rerio heart 4 Fibroblasts regeneration 5mpf, wild type, 7 days post injury ENSDARG00000036869 (tcf21) marker DOI:10.1242/dev.067041, DOI:10.1161/CIRCRESAHA.109.201400, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_7dpi) Danio rerio heart 4 Fibroblasts regeneration 5mpf, wild type, 7 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_7dpi) Danio rerio heart 4 Fibroblasts regeneration 5mpf, wild type, 7 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_7dpi) Danio rerio heart 6 Fibroblasts regeneration 5mpf, wild type, 7 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_7dpi) Danio rerio heart 10 Fibroblasts regeneration 5mpf, wild type, 7 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_7dpi) Danio rerio heart 11 Fibroblasts regeneration 5mpf, wild type, 7 days post injury ENSDARG00000088116 (gstm.3) marker DOI:10.15252/embr.202152901
    PRJNA608912 (wt_14dpi) Danio rerio heart 3 Fibroblasts regeneration 5mpf, wild type, 14 days post injury ENSDARG00000036869 (tcf21) marker DOI:10.1242/dev.067041, DOI:10.1161/CIRCRESAHA.109.201400, , DOI:10.15252/embr.202152901
    PRJNA608912 (wt_14dpi) Danio rerio heart 3 Fibroblasts regeneration 5mpf, wild type, 14 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_14dpi) Danio rerio heart 3 Fibroblasts regeneration 5mpf, wild type, 14 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_14dpi) Danio rerio heart 5 Fibroblasts regeneration 5mpf, wild type, 14 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (wt_14dpi) Danio rerio heart 5 Fibroblasts regeneration 5mpf, wild type, 14 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_uninjuried) Danio rerio heart 6 Fibroblasts regeneration 5mpf, kit mutant, uninjured ENSDARG00000036869 (tcf21) marker DOI:10.1242/dev.067041, DOI:10.1161/CIRCRESAHA.109.201400, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_uninjuried) Danio rerio heart 6 Fibroblasts regeneration 5mpf, kit mutant, uninjured ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_uninjuried) Danio rerio heart 6 Fibroblasts regeneration 5mpf, kit mutant, uninjured ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_2dpi) Danio rerio heart 4 Fibroblasts regeneration 5mpf, kit mutant, 2 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_2dpi) Danio rerio heart 4 Fibroblasts regeneration 5mpf, kit mutant, 2 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_7dpi) Danio rerio heart 4 Fibroblasts regeneration 5mpf, kit mutant, 7 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_7dpi) Danio rerio heart 4 Fibroblasts regeneration 5mpf, kit mutant, 7 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_7dpi) Danio rerio heart 6 Fibroblasts regeneration 5mpf, kit mutant, 7 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_7dpi) Danio rerio heart 6 Fibroblasts regeneration 5mpf, kit mutant, 7 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_14dpi) Danio rerio heart 1 Fibroblasts regeneration 5mpf, kit mutant, 14 days post injury ENSDARG00000006526 (fn1b) marker DOI:10.1016/j.ydbio.2013.08.012, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_14dpi) Danio rerio heart 1 Fibroblasts regeneration 5mpf, kit mutant, 14 days post injury ENSDARG00000012405 (col1a1a) marker DOI:10.1172/JCI74783, DOI:10.15252/embr.202152901
    PRJNA608912 (kit_14dpi) Danio rerio heart 12 Fibroblasts regeneration 5mpf, kit mutant, 14 days post injury ENSDARG00000088116 (gstm.3) marker DOI:10.15252/embr.202152901
    PRJNA415636 (heart, blood) Danio rerio heart, blood 6 Fibroblasts baseline adult, Zebrabow M, heart and blood ENSDARG00000006526 (fn1b) marker DOI:10.1038/nbt.4124
    PRJNA415636 (heart, blood) Danio rerio heart, blood 6 Fibroblasts baseline adult, Zebrabow M, heart and blood ENSDARG00000088116 (gstm.3) marker DOI:10.1038/nbt.4124
    PRJNA415636 (heart, blood) Danio rerio heart, blood 12 Fibroblasts baseline adult, Zebrabow M, heart and blood ENSDARG00000027582 (angptl7) marker DOI:10.1038/nbt.4124
    PRJNA415636 (heart, blood) Danio rerio heart, blood 12 Fibroblasts baseline adult, Zebrabow M, heart and blood ENSDARG00000068275 (ptx3a) marker DOI:10.1038/nbt.4124
    PRJNA415636 (heart, blood) Danio rerio heart, blood 12 Fibroblasts baseline adult, Zebrabow M, heart and blood ENSDARG00000104340 (rspo1) marker DOI:10.1038/nbt.4124
    PRJNA415636 (heart, blood) Danio rerio heart, blood 12 Fibroblasts baseline adult, Zebrabow M, heart and blood ENSDARG00000086189 (mgp) marker DOI:10.1038/nbt.4124
    GSE150498 (wildtype, 1X DSS) Danio rerio intestine 9 Fibroblasts disease 6dpf, wildtype, 1X DSS ENSDARG00000093572 (lamc3) marker DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS) Danio rerio intestine 7 Fibroblasts disease 6dpf, nod2-/-, 2X DSS ENSDARG00000044935 (hpdb) marker DOI:10.1038/s41586-021-03484-5
    GSE152982 (wild type) Danio rerio trunk 5 Fibroblasts baseline 1.25dpf, untreatment ENSDARG00000012405 (col1a1a) marker DOI:10.1371/journal.pone.0254024
    GSE152982 (wild type) Danio rerio trunk 5 Fibroblasts baseline 1.25dpf, untreatment ENSDARG00000071586 (tgfbi) marker DOI:10.1371/journal.pone.0254024

        After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.