GENE ID: ENSDARG00000037746

Symbol Location Gene type Genome version Species
actb1 1: 8649099 ~ 8653385 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000037746 (actb1), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 11)
    Myeloid cells (cluster: 6)
    Myeloid cells (cluster: 8)
    Epidermal cells (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 11)
    Myeloid cells (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Epidermal cells (cluster: 5)
    Epidermal cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Epidermal cells (cluster: 7)
    		 potential marker
    		 NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Macrophages (cluster: 7)
    		 potential marker
    		 NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    		 potential marker
    		 NA
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled) Enveloping layer cells (cluster: 7)
    		 potential marker
    		 NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Epidermal cells (cluster: 4)
    		 potential marker
    		 NA
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo EVL, Periderm (cluster: 3)
    		 potential marker
    		 NA
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells Endothelium (cluster: 8)
    		 potential marker
    		 NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Skin (cluster: 10)
    Ionocyte progenitors (cluster: 3)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 9)
    		 potential marker
    		 NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 16)
    Chondrocytes (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Endothelium (cluster: 16)
    Epidermal cells (cluster: 22)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Epidermal cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Epidermal cells (cluster: 6)
    Mesoderm (cluster: 7)
    Epidermal cells (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Epidermal cells (cluster: 12)
    Placode (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Epidermal cells (cluster: 11)
    Epidermal cells (cluster: 12)
    Placode (cluster: 4)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Epidermal cells (cluster: 5)
    Epidermal cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Epidermal cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Macrophages (cluster: 2)
    Coronary endothelial cells (cluster: 5)
    Fibroblasts (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Macrophages (cluster: 1)
    		 potential marker
    		 NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Endocardial endothelial cells (cluster: 1)
    		 potential marker
    		 NA
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Macrophages (cluster: 5)
    Neutrophils (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Endocardial endothelial cells (cluster: 1)
    		 potential marker
    		 NA
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Endocardial cells (cluster: 3)
    		 potential marker
    		 NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas duct epithelial cells (cluster: 7)
    		 potential marker
    		 NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Ciliated (cluster: 4)
    		 potential marker
    		 NA
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Immune cells (cluster: 7)
    		 potential marker
    		 NA
    GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC Endothelium (cluster: 6)
    		 potential marker
    		 NA
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae Epidermal cells (cluster: 1)
    Epidermal cells (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Neuronal progenitor (cluster: 4)
    		 potential marker
    		 NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Endothelium (cluster: 3)
    Basal cells (cluster: 4)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Endothelium (cluster: 4)
    Basal cells (cluster: 6)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Prop1+ group (cluster: 9)
    		 potential marker
    		 NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis Prop1+ group (cluster: 11)
    Gonadotrope (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Endothelium (cluster: 6)
    Pancreas duct epithelial cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Muller glia cells (cluster: 5)
    Amacrine cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment Retinal ganglion cells (cluster: 5)
    		 potential marker
    		 NA
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment Bipolar cells (cluster: 2)
    		 potential marker
    		 NA
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment Retinal progenitors (cluster: 4)
    Retinal ganglion cells (cluster: 8)
    Retinal progenitors (cluster: 4)
    Retinal ganglion cells (cluster: 8)
    		 potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Microglia (cluster: 12)
    		 potential marker
    		 NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Non-follicular epithelium (cluster: 5)
    		 potential marker
    		 NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 10)
    		 potential marker
    		 NA
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Macrophages (cluster: 17)
    Epidermal cells (cluster: 3)
    Ionocytes (cluster: 8)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Proliferating progenitors (cluster: 14)
    Neuron (cluster: 15)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture Melanoma cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture Melanoma cells (cluster: 4)
    		 potential marker
    		 NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Epidermal cells (cluster: 14)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Epithelial cells (cluster: 4)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Epithelial cells (cluster: 1)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 7)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Neutrophils (cluster: 5)
    Neuron (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 6)
    		 potential marker
    		 NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    GSE151354 (wild type) cartilage baseline 21dpf, wild type
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells