GENE ID: ENSDARG00000100133


Symbol Location Gene type Genome version Species
cnmd 9: 53725128 ~ 53744243 (+) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION


Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells Mesenchymal cells (cluster: 9)
marker
DOI:10.7554/eLife.66078
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Fibroblasts (cluster: 16)
potential marker
NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Fibroblasts (cluster: 14)
potential marker
NA
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Central support cells (cluster: 9)
potential marker
NA
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
potential marker
NA
PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Melanoma cells (cluster: 4)
potential marker
NA
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Melanoma cells (cluster: 2)
potential marker
NA
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Fibroblasts (cluster: 8)
potential marker
NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Chondrocytes (cluster: 6)
potential marker
NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Cranial neural crest (cluster: 27)
Chondrocytes (cluster: 5)
potential marker
potential marker
NA
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Floor plate (cluster: 23)
potential marker
NA
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Notochord (cluster: 15)
potential marker
NA
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Chondrocranium cells (cluster: 10)
Chondrocytes (cluster: 16)
Pronephros (cluster: 28)
Chondrocranium cells (cluster: 8)
potential marker
potential marker
potential marker
potential marker
NA
NA
NA
NA
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Neuron (cluster: 12)
potential marker
NA
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury
PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured
PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury
PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment
GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2
GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-

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