Fish Single-cell RNA Database

CELL TYPE: Pronephros

Distribution of Pronephros in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000045580	lum	4: 16349042 ~ 16354292 (-)
ENSDARG00000060070	adcy7	7: 37761524 ~ 37858666 (-)
ENSDARG00000021442	cdh11	7: 43760149 ~ 43857938 (-)
ENSDARG00000104815	lmx1ba	5: 5032833 ~ 5147336 (-)
ENSDARG00000021948	tnc	5: 28560847 ~ 28679135 (-)
ENSDARG00000102565	vasnb	3: 12440099 ~ 12487576 (+)
ENSDARG00000102981	cyp2k16	3: 12764894 ~ 12780758 (+)
ENSDARG00000058819	nog1	3: 10310090 ~ 10312232 (-)
ENSDARG00000097738	AL929222.2	3: 23220270 ~ 23238309 (-)
ENSDARG00000071215	palm3	6: 7977611 ~ 8074849 (+)
ENSDARG00000105112	ntn1a	6: 19804048 ~ 19926657 (-)
ENSDARG00000018984	eya2	6: 55909795 ~ 55997350 (-)
ENSDARG00000024829	tnn	2: 35509418 ~ 35567110 (-)
ENSDARG00000009014	col11a1b	2: 15389193 ~ 15563194 (-)
ENSDARG00000002231	plpp2a	2: 52232630 ~ 52306803 (+)
ENSDARG00000040985	itgbl1	9: 31752628 ~ 31833565 (+)
ENSDARG00000100133	cnmd	9: 53725128 ~ 53744243 (+)
ENSDARG00000099014	fxyd1	16: 45202602 ~ 45225520 (-)
ENSDARG00000101989	thrap3a	16: 35870456 ~ 35901707 (+)
ENSDARG00000101831	irx1a	16: 813780 ~ 817937 (+)
ENSDARG00000024537	emilin1a	20: 34845672 ~ 34865031 (+)
ENSDARG00000010785	thbs1b	20: 29036328 ~ 29052391 (-)
ENSDARG00000021869	rcan2	20: 39055432 ~ 39188476 (-)
ENSDARG00000096755	si:ch211-202p1.5	20: 37475836 ~ 37490612 (-)
ENSDARG00000068365	lmx1bb	8: 33258580 ~ 33381913 (-)
ENSDARG00000069093	col2a1a	8: 21195420 ~ 21219473 (+)
ENSDARG00000062487	si:dkey-6n6.1	8: 14130245 ~ 14151051 (-)
ENSDARG00000032617	fgfrl1a	14: 17442913 ~ 17563773 (-)
ENSDARG00000071586	tgfbi	14: 26511041 ~ 26536504 (-)
ENSDARG00000019353	sparc	14: 25937948 ~ 25956860 (-)
ENSDARG00000040469	enpp6	14: 4047215 ~ 4076480 (-)
ENSDARG00000057949	slc43a3b	14: 17125428 ~ 17162558 (+)
ENSDARG00000092199	si:ch211-250c4.4	13: 8168712 ~ 8229977 (-)
ENSDARG00000031483	col9a1b	13: 39119460 ~ 39160018 (-)
ENSDARG00000089519	fbln7	13: 47750933 ~ 47800342 (-)
ENSDARG00000101289	slc29a1a	13: 46830736 ~ 46917098 (-)
ENSDARG00000014673	fzd9b	18: 41648812 ~ 41650648 (-)
ENSDARG00000042210	sema3ab	18: 9323211 ~ 9439922 (+)
ENSDARG00000089354	tspan4a	18: 50801307 ~ 50823466 (+)
ENSDARG00000060457	pmp22b	12: 37275336 ~ 37299671 (-)
ENSDARG00000060893	col8a2	19: 35496282 ~ 35596207 (-)
ENSDARG00000034885	bet1	19: 40899910 ~ 40906161 (-)
ENSDARG00000024492	col9a2	19: 38422059 ~ 38467554 (+)
ENSDARG00000056594	irx1b	19: 28127654 ~ 28130658 (-)
ENSDARG00000012422	col11a2	19: 7179740 ~ 7225206 (-)
ENSDARG00000087198	cthrc1a	19: 12915498 ~ 12927089 (+)
ENSDARG00000077497	igsf10	15: 1086656 ~ 1107108 (+)
ENSDARG00000037845	col9a3	23: 495514 ~ 524780 (-)
ENSDARG00000089187	wfdc2	23: 12418613 ~ 12423778 (-)
ENSDARG00000095268	si:dkey-261h17.1	23: 32499916 ~ 32532612 (+)
ENSDARG00000076299	FQ323119.1	23: 4086493 ~ 4091009 (-)
ENSDARG00000077938	cd248b	21: 26493694 ~ 26495700 (-)
ENSDARG00000074772	ccl44	11: 6182680 ~ 6188413 (-)
ENSDARG00000044894	zgc:113307	11: 21050326 ~ 21061566 (+)
ENSDARG00000076120	foxp4	11: 21910343 ~ 22094392 (+)
ENSDARG00000073699	col9a1a	11: 11274940 ~ 11301357 (-)
ENSDARG00000011407	col2a1b	11: 32007 ~ 55224 (-)
ENSDARG00000116937	BX927333.1	10: 39952995 ~ 40113996 (+)
ENSDARG00000059391	gyg1b	24: 3307857 ~ 3326369 (+)
ENSDARG00000026165	col11a1a	24: 28764021 ~ 28893303 (-)
ENSDARG00000108475	otos	24: 26302781 ~ 26304386 (-)
ENSDARG00000005485	ucmab	25: 7982979 ~ 7988936 (+)
ENSDARG00000039949	fibina	25: 35502552 ~ 35503409 (+)
ENSDARG00000096887	CR381618.1	25: 30915178 ~ 31040725 (+)
--	vit	--
--	xloc-016094	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Pronephros.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE176129 (pdgfrb-positive)	Danio rerio	whole body	28	Pronephros	baseline	5dpf, FACS-isolated pdgfrb-positive cells	ENSDARG00000040469 (enpp6)	marker	DOI:10.7554/eLife.44431

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Pronephros

Distribution of Pronephros in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences