GENE ID: ENSDARG00000092807

Symbol Location Gene type Genome version Species
si:dkey-151g10.6 23: 25305431 ~ 25306603 (+) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Progenitors (cluster: 11)
Progenitors (cluster: 12)
Endothelium (cluster: 15)
Nascent neurons (cluster: 7)
Progenitors (cluster: 8)
 potential marker
potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
NA
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Radial glia (cluster: 3)
 potential marker
 NA
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Monocytes (cluster: 1)
HSPCs (cluster: 2)
HSPCs (cluster: 3)
Endothelium (cluster: 5)
 potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. HSPCs (cluster: 1)
HSPCs (cluster: 2)
 potential marker
potential marker
 NA
NA
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Immune cells (cluster: 4)
 potential marker
 NA
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Immune cells (cluster: 4)
 potential marker
 NA
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
 potential marker
 NA
GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled) Ectoderm cells (cluster: 2)
Ectoderm cells (cluster: 5)
 potential marker
potential marker
 NA
NA
PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Skin (cluster: 2)
Ionocyte progenitors (cluster: 8)
 potential marker
potential marker
 NA
NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Cranial neural crest (cluster: 1)
Neuron (cluster: 3)
 potential marker
potential marker
 NA
NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Somites (cluster: 12)
Skeletal muscle cells (cluster: 17)
Neuroblast (cluster: 3)
Chondrocytes (cluster: 5)
Cranial neural crest (cluster: 6)
 potential marker
potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Skeletal muscle cells (cluster: 15)
 potential marker
 NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Neutrophils (cluster: 8)
 potential marker
 NA
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Fibroblasts (cluster: 3)
Fibroblasts (cluster: 7)
 potential marker
potential marker
 NA
NA
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Fibroblasts (cluster: 6)
Immune cells (cluster: 8)
 potential marker
potential marker
 NA
NA
PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Fibroblasts (cluster: 5)
 potential marker
 NA
PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Smooth muscle cells (cluster: 6)
Pancreas duct epithelial cells (cluster: 7)
 potential marker
potential marker
 NA
NA
PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Progenitors (cluster: 6)
 potential marker
 NA
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae Epidermal cells (cluster: 2)
 potential marker
 NA
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Lymphocyte cells (cluster: 1)
 potential marker
 NA
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Lymphocyte cells (cluster: 2)
Basal cells (cluster: 4)
 potential marker
potential marker
 NA
NA
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Lymphocyte cells (cluster: 2)
 potential marker
 NA
PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Smooth muscle cells (cluster: 3)
Pancreas duct epithelial cells (cluster: 7)
 potential marker
potential marker
 NA
NA
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg Rod opsin (cluster: 4)
 potential marker
 NA
PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih RPE (cluster: 10)
 potential marker
 NA
PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Stromal (cluster: 4)
 potential marker
 NA
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Chondrocranium cells (cluster: 10)
Skeletal muscle cells (cluster: 24)
 potential marker
potential marker
 NA
NA
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT HSPCs (cluster: 1)
 potential marker
 NA
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- HSPCs (cluster: 5)
 potential marker
 NA
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (12hpf) embryo baseline 12hpf, FACS sorted sox10:nEOS cells
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos
PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA734348 (dome, control) embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured
PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury
PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood
GSE123241 (wild type) neuromast baseline 5dpf, wild type during sensory hair cell regeneration, lateral line sensory
PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
PRJNA641144 (D_PRO) tumor disease adult, ZMEL1-PRO cells in vitro individual culture
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors
PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture
PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture
PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/-

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