Fish Single-cell RNA Database

CELL TYPE: Somites

Distribution of Somites in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000102464	wnt5b	4: 8532580 ~ 8663117 (+)
ENSDARG00000018111	kdm7aa	4: 22484830 ~ 22519525 (-)
ENSDARG00000070546	msgn1	4: 306036 ~ 308006 (+)
ENSDARG00000045676	calua	4: 13568469 ~ 13576215 (+)
ENSDARG00000045580	lum	4: 16349042 ~ 16354292 (-)
ENSDARG00000012066	dcn	4: 16368762 ~ 16412084 (-)
ENSDARG00000025073	rpl18a	4: 391297 ~ 398451 (+)
ENSDARG00000003570	hsp90b1	4: 9836465 ~ 9843836 (+)
ENSDARG00000037960	lrrc17	4: 20141191 ~ 20156085 (-)
ENSDARG00000032765	net1	4: 11573568 ~ 11603149 (-)
ENSDARG00000078520	ikbip	4: 77966055 ~ 77974820 (+)
ENSDARG00000063563	creb3l2	4: 4712410 ~ 4751983 (-)
ENSDARG00000032405	ckap4	4: 77975221 ~ 77979432 (-)
ENSDARG00000045694	prickle1b	4: 13963499 ~ 13995766 (-)
ENSDARG00000070535	ripply2	4: 912563 ~ 914738 (+)
ENSDARG00000011582	sox5	4: 16982249 ~ 17055950 (-)
ENSDARG00000045487	rps16	4: 21648010 ~ 21652812 (-)
ENSDARG00000007277	myf5	4: 21741228 ~ 21745107 (+)
ENSDARG00000094854	ms4a17a.9	4: 76608282 ~ 76633286 (+)
ENSDARG00000094809	ms4a17a.11	4: 76575585 ~ 76588333 (+)
ENSDARG00000103713	cd248a	7: 18364176 ~ 18367267 (+)
ENSDARG00000002235	mmp14a	7: 24124289 ~ 24149670 (-)
ENSDARG00000104227	nop10	7: 1505507 ~ 1508912 (+)
ENSDARG00000006754	mllt3	7: 18779555 ~ 18881358 (-)
ENSDARG00000103682	si:dkey-23i12.5	7: 25042078 ~ 25046752 (+)
ENSDARG00000036080	cd81a	7: 32983440 ~ 33023404 (-)
ENSDARG00000019098	cd82a	7: 26709251 ~ 26739674 (+)
ENSDARG00000086421	si:ch211-212k18.8	7: 19495379 ~ 19502294 (+)
ENSDARG00000029500	rpl34	7: 59649399 ~ 59664545 (+)
ENSDARG00000017676	mmp2	7: 35410050 ~ 35432901 (-)
ENSDARG00000036036	mdka	7: 39166460 ~ 39178198 (+)
ENSDARG00000017078	mespaa	7: 15308042 ~ 15333427 (+)
ENSDARG00000053362	cilp	7: 31432140 ~ 31441420 (-)
ENSDARG00000046013	rasl11a	7: 51314734 ~ 51321126 (-)
ENSDARG00000036809	NA	7: 15373412 ~ 15413188 (-)
ENSDARG00000014690	rps4x	7: 51633815 ~ 51639699 (-)
ENSDARG00000074340	serf2	7: 30275513 ~ 30280934 (-)
ENSDARG00000011201	rplp2l	7: 12959846 ~ 12968701 (-)
ENSDARG00000053493	aldh1a2	7: 30326184 ~ 30367650 (-)
ENSDARG00000068262	vamp5	5: 28297250 ~ 28307470 (+)
ENSDARG00000035622	xbp1	5: 15944411 ~ 15948920 (-)
ENSDARG00000019230	rpl7a	5: 33284144 ~ 33287691 (-)
ENSDARG00000053091	NA	5: 43860564 ~ 43959972 (-)
ENSDARG00000052846	fsta	5: 40504910 ~ 40510399 (-)
ENSDARG00000051783	rplp0	5: 1950660 ~ 1963498 (-)
ENSDARG00000014722	her1	5: 68788658 ~ 68795063 (-)
ENSDARG00000017917	her7	5: 68807170 ~ 68808485 (+)
ENSDARG00000041065	hspb1	5: 3568016 ~ 3584815 (-)
ENSDARG00000058128	msna	5: 22133153 ~ 22174037 (+)
ENSDARG00000039887	c1qbp	5: 3914403 ~ 3927763 (-)
ENSDARG00000051957	selenom	5: 69278089 ~ 69287567 (+)
ENSDARG00000068036	tmem119b	5: 31872049 ~ 31875645 (-)
ENSDARG00000058105	rpl36a	5: 22510639 ~ 22515186 (+)
ENSDARG00000015072	dmrt2a	5: 45007962 ~ 45013409 (+)
ENSDARG00000035136	selenow1	5: 61998641 ~ 62005081 (+)
ENSDARG00000032482	si:dkey-40c11.2	5: 43530388 ~ 43608280 (+)
ENSDARG00000038312	rcl1	5: 1833741 ~ 1869982 (-)
ENSDARG00000103846	hspa5	5: 2713779 ~ 2721686 (-)
ENSDARG00000003599	rpl3	3: 29867213 ~ 29871364 (-)
ENSDARG00000015128	rpl27	3: 29893966 ~ 29899230 (-)
ENSDARG00000044588	emp2	3: 27027781 ~ 27056180 (+)
ENSDARG00000037895	ramp2	3: 36836711 ~ 36846496 (-)
ENSDARG00000056012	eve1	3: 23641935 ~ 23643830 (-)
ENSDARG00000011579	hoxb10a	3: 23669267 ~ 23671863 (+)
ENSDARG00000056023	hoxb9a	3: 23677351 ~ 23682436 (+)
ENSDARG00000056027	hoxb8a	3: 23687909 ~ 23690481 (+)
ENSDARG00000056030	hoxb7a	3: 23691847 ~ 23696208 (+)
ENSDARG00000029263	hoxb3a	3: 23697997 ~ 23771945 (+)
ENSDARG00000077467	sox10	3: 1492174 ~ 1501255 (+)
ENSDARG00000014746	rbfox1	3: 27982269 ~ 28428198 (-)
ENSDARG00000037961	rcn3	3: 32535986 ~ 32541072 (-)
ENSDARG00000037870	actb2	3: 40526107 ~ 40529804 (-)
ENSDARG00000027063	arpc1b	3: 40809011 ~ 40820612 (+)
ENSDARG00000057867	lasp1	3: 16072966 ~ 16110351 (-)
ENSDARG00000009040	si:ch73-141c7.1	3: 18023975 ~ 18030938 (-)
ENSDARG00000012405	col1a1a	3: 23221047 ~ 23239458 (+)
ENSDARG00000032619	tob1a	3: 18185616 ~ 18189283 (-)
ENSDARG00000010160	rps15a	3: 26345732 ~ 26351656 (+)
ENSDARG00000013307	rpl19	3: 16229911 ~ 16232442 (+)
ENSDARG00000077291	rps2	3: 18398876 ~ 18403179 (+)
ENSDARG00000053457	rpl23	3: 33423986 ~ 33427803 (-)
ENSDARG00000105223	pmp22a	3: 50861176 ~ 50865079 (-)
ENSDARG00000025428	socs3a	3: 57423137 ~ 57425961 (-)
ENSDARG00000099195	ier2a	3: 33761549 ~ 33762726 (+)
ENSDARG00000098465	si:ch73-366l1.5	3: 60525982 ~ 60571218 (-)
ENSDARG00000020232	eif6	6: 52339548 ~ 52348651 (-)
ENSDARG00000028618	krt18b	6: 39360377 ~ 39365467 (+)
ENSDARG00000097445	si:dkey-195m11.8	6: 39370587 ~ 39378733 (+)
ENSDARG00000074094	tgm2b	6: 2093206 ~ 2122486 (+)
ENSDARG00000105112	ntn1a	6: 19804048 ~ 19926657 (-)
ENSDARG00000092660	cyp27c1	6: 9568149 ~ 9581949 (-)
ENSDARG00000104353	nop58	6: 9664206 ~ 9695294 (-)
ENSDARG00000015862	rpl5b	6: 29086594 ~ 29097393 (+)
ENSDARG00000006514	her6	6: 36551083 ~ 36552844 (-)
ENSDARG00000037000	fkbp11	6: 7428613 ~ 7439490 (-)
ENSDARG00000070486	rbp7b	6: 45932241 ~ 45933368 (+)
ENSDARG00000021032	foxd3	6: 32092032 ~ 32093830 (-)
ENSDARG00000100446	si:ch211-286o17.1	6: 47424266 ~ 47462413 (+)
ENSDARG00000029252	ssb	6: 3716666 ~ 3728694 (+)
ENSDARG00000030408	rps26l	6: 49520124 ~ 49526510 (-)
ENSDARG00000008030	myl9b	6: 1787160 ~ 1799561 (+)
ENSDARG00000009534	wls	2: 10342177 ~ 10386738 (-)
ENSDARG00000024829	tnn	2: 35509418 ~ 35567110 (-)
ENSDARG00000035860	rps28	2: 24507597 ~ 24509698 (+)
ENSDARG00000009014	col11a1b	2: 15389193 ~ 15563194 (-)
ENSDARG00000035858	cnn2	2: 24548249 ~ 24554432 (-)
ENSDARG00000027590	sept2	2: 22592139 ~ 22615366 (+)
ENSDARG00000091481	foxc1a	2: 686873 ~ 689047 (-)
ENSDARG00000055996	rps8a	2: 26498446 ~ 26501868 (+)
ENSDARG00000102291	eef1da	2: 50999477 ~ 51032888 (+)
ENSDARG00000099776	glula	2: 18988407 ~ 18992350 (+)
ENSDARG00000008388	mmp14b	2: 38161318 ~ 38183641 (+)
ENSDARG00000061140	colec12	2: 31382590 ~ 31435158 (+)
ENSDARG00000039650	itm2cb	2: 48284464 ~ 48298985 (-)
ENSDARG00000019335	hes6	2: 48288461 ~ 48304696 (+)
ENSDARG00000055945	asph	2: 26655744 ~ 26682182 (+)
ENSDARG00000007320	rpl7	2: 30177476 ~ 30182353 (-)
ENSDARG00000033971	prrx1a	2: 23165250 ~ 23172708 (-)
ENSDARG00000039070	im:7138239	2: 53501750 ~ 53525896 (-)
ENSDARG00000098730	en1b	1: 7679328 ~ 7683372 (+)
ENSDARG00000006526	fn1b	1: 5504128 ~ 5543065 (-)
ENSDARG00000036371	acta1a	1: 53945934 ~ 53953532 (+)
ENSDARG00000060397	hhip	1: 35790082 ~ 35835863 (+)
ENSDARG00000054031	mxd4	1: 26071869 ~ 26096572 (+)
ENSDARG00000074815	mxra5a	1: 33322174 ~ 33334732 (+)
ENSDARG00000035692	rps3a	1: 24355515 ~ 24359653 (+)
ENSDARG00000031894	lef1	1: 49814461 ~ 49905357 (+)
ENSDARG00000002937	meis1a	1: 51475094 ~ 51525086 (+)
ENSDARG00000037350	rpl9	1: 23269503 ~ 23274504 (-)
ENSDARG00000015559	fstl1a	1: 47459723 ~ 47485360 (+)
ENSDARG00000019838	ugdh	1: 23283532 ~ 23294753 (-)
ENSDARG00000078659	tmem176	1: 44935442 ~ 44940953 (-)
ENSDARG00000075045	cxcl18b	1: 49222164 ~ 49225890 (-)
ENSDARG00000074378	junba	1: 51732979 ~ 51734535 (-)
ENSDARG00000019778	rps6	1: 45043767 ~ 45049603 (-)
ENSDARG00000058996	jam2a	1: 594584 ~ 608247 (+)
ENSDARG00000104279	appa	1: 617620 ~ 656693 (-)
ENSDARG00000031164	tuba8l2	1: 5402476 ~ 5419116 (+)
ENSDARG00000069989	bnc2	1: 27023687 ~ 27212459 (+)
ENSDARG00000001873	phgdh	9: 48185936 ~ 48214216 (-)
ENSDARG00000040666	nifk	9: 38158570 ~ 38162095 (+)
ENSDARG00000019815	fn1a	9: 15362300 ~ 15424639 (-)
ENSDARG00000059280	hoxd3a	9: 1937049 ~ 1959917 (-)
ENSDARG00000059274	hoxd9a	9: 1964005 ~ 1965727 (-)
ENSDARG00000057859	hoxd10a	9: 1967707 ~ 1970071 (-)
ENSDARG00000059267	hoxd11a	9: 1975818 ~ 1978090 (-)
ENSDARG00000014867	rpl8	9: 33323104 ~ 33329787 (-)
ENSDARG00000079071	jam2b	9: 34996245 ~ 35010396 (+)
ENSDARG00000056160	hspd1	9: 32286605 ~ 32300783 (-)
ENSDARG00000001733	gulp1a	9: 42546504 ~ 42650623 (+)
ENSDARG00000039576	fstl1b	9: 9735493 ~ 9842149 (-)
ENSDARG00000031678	col5a2a	9: 42653188 ~ 42696408 (-)
ENSDARG00000007099	cx43.4	9: 46405587 ~ 46415847 (-)
ENSDARG00000070155	tuba8l3	9: 7662638 ~ 7673856 (-)
ENSDARG00000010962	fkbp7	9: 42728269 ~ 42730672 (-)
ENSDARG00000025348	igfbp5b	9: 46820636 ~ 46842179 (-)
ENSDARG00000099236	sept10	9: 55857193 ~ 55875077 (+)
ENSDARG00000014321	en1a	9: 778745 ~ 785444 (-)
ENSDARG00000006467	pcdh8	9: 53654866 ~ 53666031 (-)
ENSDARG00000076010	twist1b	16: 19732543 ~ 19734149 (+)
ENSDARG00000073978	crabp2a	16: 14383479 ~ 14397003 (-)
ENSDARG00000043304	nop2	16: 17234540 ~ 17251898 (-)
ENSDARG00000040695	fkbp14	16: 20294976 ~ 20305104 (+)
ENSDARG00000090552	si:dkey-7j14.6	16: 43028079 ~ 43041450 (-)
ENSDARG00000011405	rps9	16: 31921812 ~ 31927522 (+)
ENSDARG00000007009	hoxa11b	16: 20904754 ~ 20907378 (+)
ENSDARG00000031337	hoxa10b	16: 20910186 ~ 20913003 (+)
ENSDARG00000056819	hoxa9b	16: 20915319 ~ 20917584 (+)
ENSDARG00000037998	flot1b	16: 10287588 ~ 10316359 (-)
ENSDARG00000033172	nr2f5	16: 46294337 ~ 46327301 (+)
ENSDARG00000040944	ntd5	16: 13568697 ~ 13595027 (-)
ENSDARG00000092170	apoc1	16: 23972126 ~ 23973721 (+)
ENSDARG00000053912	fbl	16: 42177659 ~ 42186093 (-)
ENSDARG00000076568	sec61b	16: 27224068 ~ 27231659 (+)
ENSDARG00000030602	rps19	16: 24188114 ~ 24195361 (-)
ENSDARG00000040251	ctsk	16: 29492749 ~ 29502787 (+)
ENSDARG00000076862	gask1a	16: 8188188 ~ 8251985 (-)
ENSDARG00000101481	rbp5	16: 31706841 ~ 31718013 (-)
ENSDARG00000021443	zfp36l1b	20: 9575374 ~ 9580446 (-)
ENSDARG00000042566	rps7	20: 30372352 ~ 30377221 (-)
ENSDARG00000010785	thbs1b	20: 29036328 ~ 29052391 (-)
ENSDARG00000059933	plpp3	20: 7964356 ~ 8024582 (-)
ENSDARG00000043531	jun	20: 15552657 ~ 15554606 (+)
ENSDARG00000031683	fosab	20: 46552311 ~ 46554440 (-)
ENSDARG00000070494	pdgfra	20: 22435180 ~ 22476255 (-)
ENSDARG00000020133	jdp2b	20: 46586678 ~ 46595151 (+)
ENSDARG00000030092	tram2	20: 48116476 ~ 48139941 (+)
ENSDARG00000018693	cdh2	20: 17581881 ~ 17819238 (+)
ENSDARG00000026473	six1b	20: 20499869 ~ 20505918 (+)
ENSDARG00000027930	naprt	20: 52273446 ~ 52314299 (-)
ENSDARG00000010478	hsp90aa1.1	20: 53982317 ~ 54012043 (-)
ENSDARG00000021789	myoc	20: 15015557 ~ 15021628 (+)
ENSDARG00000078280	nkx3-1	8: 50256930 ~ 50259448 (-)
ENSDARG00000068213	fzd10	8: 44295983 ~ 44298964 (-)
ENSDARG00000028275	sult1st1	8: 46499098 ~ 46509194 (-)
ENSDARG00000067544	tcf15	8: 28593707 ~ 28595491 (+)
ENSDARG00000006901	si:ch1073-459j12.1	8: 44759576 ~ 44800841 (+)
ENSDARG00000004757	ybx1	8: 47143829 ~ 47152086 (-)
ENSDARG00000007329	tbx16	8: 51733907 ~ 51753604 (-)
ENSDARG00000093549	selenop	8: 31435452 ~ 31443334 (+)
ENSDARG00000043130	notch2	8: 19548985 ~ 19619792 (+)
ENSDARG00000042905	rpl10a	8: 23738122 ~ 23742985 (+)
ENSDARG00000068263	csf1b	8: 37168570 ~ 37202417 (+)
ENSDARG00000058133	foxd2	8: 19674369 ~ 19676640 (+)
ENSDARG00000002172	aplnra	8: 40325690 ~ 40327397 (-)
ENSDARG00000059746	plod1a	8: 47850073 ~ 47895817 (+)
ENSDARG00000076290	calr	8: 16582339 ~ 16592491 (-)
ENSDARG00000042485	foxd5	8: 30452945 ~ 30454096 (+)
ENSDARG00000027582	angptl7	8: 46217861 ~ 46221296 (+)
ENSDARG00000102778	fgf17	8: 52732107 ~ 52745168 (-)
ENSDARG00000013302	gpx8	8: 40177361 ~ 40183197 (-)
ENSDARG00000070794	greb1	17: 30369107 ~ 30418016 (+)
ENSDARG00000075707	nid2a	17: 14796926 ~ 14876758 (-)
ENSDARG00000070603	hspa12a	17: 21220934 ~ 21280185 (-)
ENSDARG00000071082	p4ha1b	17: 20144626 ~ 20167236 (-)
ENSDARG00000071005	ppp1r3ca	17: 23311377 ~ 23314178 (+)
ENSDARG00000033616	selenon	17: 24687338 ~ 24695198 (+)
ENSDARG00000097478	qkia	17: 27723490 ~ 27814135 (+)
ENSDARG00000088862	stxbp6	17: 50798484 ~ 50841285 (+)
ENSDARG00000027984	gstz1	17: 45106424 ~ 45114519 (+)
ENSDARG00000032617	fgfrl1a	14: 17442913 ~ 17563773 (-)
ENSDARG00000055786	prss23	14: 30802465 ~ 30808174 (-)
ENSDARG00000025131	lbx2	14: 5383060 ~ 5391183 (+)
ENSDARG00000058062	magt1	14: 12370375 ~ 12391506 (-)
ENSDARG00000071586	tgfbi	14: 26511041 ~ 26536504 (-)
ENSDARG00000037555	atoh8	14: 9507291 ~ 9522364 (-)
ENSDARG00000036316	rpl39	14: 33331773 ~ 33348221 (-)
ENSDARG00000061764	ahnak	14: 26759332 ~ 26796334 (+)
ENSDARG00000105380	fgl1	14: 30279391 ~ 30283897 (+)
ENSDARG00000037655	pls3	14: 13453130 ~ 13525458 (+)
ENSDARG00000006456	pdgfrl	14: 30359124 ~ 30366196 (-)
ENSDARG00000053684	aldob	14: 21106444 ~ 21121199 (+)
ENSDARG00000036194	pitx2	14: 36218072 ~ 36231211 (+)
ENSDARG00000094324	efemp2a	14: 30669662 ~ 30704075 (-)
ENSDARG00000036292	cdx4	14: 32961718 ~ 32965169 (-)
ENSDARG00000019353	sparc	14: 25937948 ~ 25956860 (-)
ENSDARG00000019636	yif1a	14: 30753666 ~ 30759503 (+)
ENSDARG00000041607	eif4ebp3l	14: 6972868 ~ 6987649 (-)
ENSDARG00000063626	ddx21	13: 319575 ~ 330004 (-)
ENSDARG00000103435	sorbs1	13: 23132666 ~ 23226460 (+)
ENSDARG00000004695	six4a	13: 31636732 ~ 31647323 (-)
ENSDARG00000068710	nid1a	13: 50064464 ~ 50139916 (-)
ENSDARG00000013763	rrbp1a	13: 33611703 ~ 33639050 (-)
ENSDARG00000039034	marcksl1a	13: 46177478 ~ 46180510 (+)
ENSDARG00000007219	actn1	13: 36321088 ~ 36391502 (-)
ENSDARG00000039482	calhm2.1	13: 25421531 ~ 25426955 (+)
ENSDARG00000039483	si:dkey-51a16.9	13: 25428677 ~ 25438298 (+)
ENSDARG00000037116	cxcl12a	13: 30804367 ~ 30819715 (+)
ENSDARG00000020541	ism1	13: 34765141 ~ 34793487 (-)
ENSDARG00000056986	dact2	13: 43400443 ~ 43407199 (+)
ENSDARG00000039273	fbln5	13: 33155428 ~ 33170733 (-)
ENSDARG00000031981	pcbd1	13: 25720969 ~ 25726534 (+)
ENSDARG00000020219	dld	13: 6075572 ~ 6081803 (-)
ENSDARG00000099761	vox	13: 50621840 ~ 50624743 (-)
ENSDARG00000052783	cdc42ep3	13: 42124566 ~ 42143637 (+)
ENSDARG00000089519	fbln7	13: 47750933 ~ 47800342 (-)
ENSDARG00000100483	vent	13: 50607664 ~ 50614639 (-)
ENSDARG00000011724	marveld1	13: 39532050 ~ 39533365 (+)
ENSDARG00000099439	serp1	18: 3572314 ~ 3576434 (+)
ENSDARG00000036239	gatm	18: 35725 ~ 46010 (-)
ENSDARG00000041182	rpl4	18: 19451070 ~ 19456269 (-)
ENSDARG00000058003	wfdc1	18: 14595546 ~ 14617707 (+)
ENSDARG00000014165	ssr3	18: 34542525 ~ 34549758 (-)
ENSDARG00000005115	calub	18: 7015283 ~ 7032227 (-)
ENSDARG00000030465	tmem263	18: 15259388 ~ 15269272 (-)
ENSDARG00000101844	mibp2	18: 5490668 ~ 5497405 (+)
ENSDARG00000055868	rsl1d1	12: 19384615 ~ 19393968 (+)
ENSDARG00000061226	timp2a	12: 33990947 ~ 34035364 (-)
ENSDARG00000063612	antxr1c	12: 2676878 ~ 2744646 (+)
ENSDARG00000071426	lrrc59	12: 31775182 ~ 31812186 (+)
ENSDARG00000023299	snu13b	12: 10443785 ~ 10447178 (+)
ENSDARG00000026611	socs3b	12: 34258139 ~ 34277465 (+)
ENSDARG00000033999	cyp26a1	12: 8954761 ~ 8958353 (-)
ENSDARG00000053528	nog3	12: 32388860 ~ 32390444 (+)
ENSDARG00000035809	col1a1b	12: 3095699 ~ 3133483 (-)
ENSDARG00000056783	raraa	12: 10952794 ~ 11157237 (+)
ENSDARG00000045129	fkbp10b	12: 13905286 ~ 13957037 (+)
ENSDARG00000045066	entpd1	12: 30740797 ~ 30777743 (-)
ENSDARG00000011785	tbx6	12: 3912544 ~ 3923070 (+)
ENSDARG00000029621	sgms1	12: 6065661 ~ 6114296 (+)
ENSDARG00000037361	kdelr2b	12: 982796 ~ 990149 (-)
ENSDARG00000103092	grem2b	12: 47543832 ~ 47558276 (-)
ENSDARG00000045074	arl4d	12: 27243059 ~ 27245757 (+)
ENSDARG00000007891	meox1	12: 27462225 ~ 27469267 (+)
ENSDARG00000037618	ddit4	12: 48340133 ~ 48342259 (+)
ENSDARG00000021806	zfp36l2	12: 25376639 ~ 25380028 (-)
ENSDARG00000105013	hoxa9a	19: 19747430 ~ 19752145 (+)
ENSDARG00000023290	fabp3	19: 42955280 ~ 42993306 (+)
ENSDARG00000021864	rplp1	19: 1852078 ~ 1855368 (-)
ENSDARG00000077407	si:dkey-184p18.2	19: 34091552 ~ 34117056 (-)
ENSDARG00000086207	grin2da	19: 9909962 ~ 10081047 (-)
ENSDARG00000030402	twist1a	19: 2229162 ~ 2231188 (-)
ENSDARG00000005230	ssr2	19: 11231083 ~ 11238721 (-)
ENSDARG00000062590	pleca	19: 22407819 ~ 22621991 (-)
ENSDARG00000020007	col1a2	19: 40983221 ~ 41002980 (+)
ENSDARG00000005023	fkbp9	19: 42591150 ~ 42607451 (-)
ENSDARG00000102995	rbm24a	19: 46113828 ~ 46148977 (+)
ENSDARG00000104701	map7d1b	19: 3929084 ~ 4010263 (-)
ENSDARG00000034956	myclb	19: 30805513 ~ 30811161 (-)
ENSDARG00000018010	crtap	19: 42609132 ~ 42617723 (+)
ENSDARG00000009194	col16a1	19: 38473758 ~ 38611814 (-)
ENSDARG00000004311	ldlrap1a	19: 29337789 ~ 29363779 (+)
ENSDARG00000009285	rpl15	19: 17385561 ~ 17395587 (+)
ENSDARG00000087198	cthrc1a	19: 12915498 ~ 12927089 (+)
ENSDARG00000100791	tril	19: 19489588 ~ 19491864 (+)
ENSDARG00000043509	rpl11	19: 43780970 ~ 43786940 (+)
ENSDARG00000040815	tsku	15: 29343280 ~ 29354020 (-)
ENSDARG00000019949	serpinh1b	15: 29382454 ~ 29388012 (-)
ENSDARG00000043102	lxn	15: 1179876 ~ 1198886 (-)
ENSDARG00000104267	postnb	15: 32710094 ~ 32741733 (+)
ENSDARG00000103443	vwde	15: 33989181 ~ 33994418 (+)
ENSDARG00000002336	dlc	15: 20463448 ~ 20468302 (-)
ENSDARG00000031098	timm50	15: 20475694 ~ 20528494 (-)
ENSDARG00000043453	rps5	15: 39964943 ~ 39971756 (-)
ENSDARG00000043446	efhd1	15: 40188076 ~ 40212204 (+)
ENSDARG00000097824	smco4	15: 41238247 ~ 41245962 (-)
ENSDARG00000103720	zgc:162730	15: 13984879 ~ 13986761 (+)
ENSDARG00000056438	her9	23: 23399520 ~ 23401305 (-)
ENSDARG00000032963	her12	23: 21444922 ~ 21446985 (-)
ENSDARG00000086471	pkig	23: 25879320 ~ 25942859 (+)
ENSDARG00000037517	slc35c2	23: 20431140 ~ 20511954 (+)
ENSDARG00000019444	ssr4	23: 18569291 ~ 18572685 (-)
ENSDARG00000036878	sh3bgrl2	23: 31405497 ~ 31423729 (+)
ENSDARG00000036875	rps12	23: 31431956 ~ 31435922 (+)
ENSDARG00000058818	rbm38	23: 6586467 ~ 6632106 (+)
ENSDARG00000076317	plod3	23: 44843860 ~ 44879214 (-)
ENSDARG00000025581	rpl10	23: 19712557 ~ 19715859 (-)
ENSDARG00000056695	phc2a	23: 22063484 ~ 22130778 (-)
ENSDARG00000095268	si:dkey-261h17.1	23: 32499916 ~ 32532612 (+)
ENSDARG00000058358	krt8	23: 10249626 ~ 10254288 (-)
ENSDARG00000074201	flna	23: 19759128 ~ 19809027 (+)
ENSDARG00000018404	krt18a.1	23: 10347851 ~ 10351754 (+)
ENSDARG00000034117	rarga	23: 35847200 ~ 35963735 (+)
ENSDARG00000033738	zgc:153867	23: 28374458 ~ 28388513 (+)
ENSDARG00000070339	hoxc3a	23: 36087219 ~ 36149371 (+)
ENSDARG00000070348	hoxc10a	23: 35969228 ~ 36086895 (+)
ENSDARG00000070346	hoxc8a	23: 36101185 ~ 36103635 (+)
ENSDARG00000070343	hoxc6a	23: 36115541 ~ 36116907 (+)
ENSDARG00000092809	hoxc9a	23: 36095260 ~ 36097488 (+)
ENSDARG00000062129	mxra8b	23: 29889089 ~ 29906163 (+)
ENSDARG00000092807	si:dkey-151g10.6	23: 25305431 ~ 25306603 (+)
ENSDARG00000115868	sp5l	23: 28023091 ~ 28025943 (-)
ENSDARG00000019646	twist3	23: 2669 ~ 9339 (+)
ENSDARG00000023062	ccn1	23: 45456490 ~ 45465320 (+)
ENSDARG00000069980	lman1	21: 10701834 ~ 10732281 (+)
ENSDARG00000020811	efemp2b	21: 25588436 ~ 25604609 (-)
ENSDARG00000012593	col5a1	21: 6556635 ~ 6725780 (+)
ENSDARG00000012820	nop56	21: 11958758 ~ 11970199 (-)
ENSDARG00000015557	zgc:100829	21: 28747069 ~ 28794078 (+)
ENSDARG00000017388	gstt1b	21: 15713097 ~ 15720534 (+)
ENSDARG00000006316	rpl23a	21: 26071874 ~ 26074640 (+)
ENSDARG00000103554	notch1a	21: 4766244 ~ 4849056 (-)
ENSDARG00000057556	rpl17	21: 18997503 ~ 19067517 (+)
ENSDARG00000054916	eif4ebp3	21: 26401332 ~ 26406304 (-)
ENSDARG00000020072	thbs4b	21: 5129513 ~ 5162687 (+)
ENSDARG00000044695	ccdc80l2	21: 19834072 ~ 19841870 (+)
ENSDARG00000069422	nhp2	21: 30401784 ~ 30409204 (-)
ENSDARG00000069048	serpinf1	21: 40106448 ~ 40120169 (+)
ENSDARG00000003835	stom	21: 17541634 ~ 17570251 (+)
ENSDARG00000103251	sh3pxd2b	21: 42717424 ~ 42780082 (+)
ENSDARG00000016484	dkc1	21: 43702010 ~ 43716471 (+)
ENSDARG00000036629	rps14	21: 33454147 ~ 33458430 (+)
ENSDARG00000013430	bhmt	21: 40408 ~ 45920 (-)
ENSDARG00000068732	spry4	21: 44684577 ~ 44691068 (+)
ENSDARG00000070849	rps15	11: 5926850 ~ 5931622 (+)
ENSDARG00000020544	rem1	11: 24313931 ~ 24332052 (+)
ENSDARG00000021838	rps23	11: 42556395 ~ 42561215 (+)
ENSDARG00000044895	fmoda	11: 21025895 ~ 21031773 (-)
ENSDARG00000044894	zgc:113307	11: 21050326 ~ 21061566 (+)
ENSDARG00000071212	p3h1	11: 39075613 ~ 39105253 (-)
ENSDARG00000103129	nid1b	11: 44548209 ~ 44603789 (+)
ENSDARG00000074023	rbms1a	11: 10909183 ~ 10960394 (+)
ENSDARG00000041991	rrp9	11: 36215698 ~ 36230163 (-)
ENSDARG00000061436	col6a2	11: 33921358 ~ 33960318 (-)
ENSDARG00000074908	col6a1	11: 33996526 ~ 34065718 (-)
ENSDARG00000098431	comp	11: 6941389 ~ 6974022 (-)
ENSDARG00000009438	myog	11: 22592935 ~ 22605981 (-)
ENSDARG00000056995	snai1a	11: 25251495 ~ 25257595 (-)
ENSDARG00000075343	csf1a	11: 23265157 ~ 23297192 (+)
ENSDARG00000098359	il17rd	11: 42641404 ~ 42722658 (+)
ENSDARG00000115271	NA	11: 44898714 ~ 44906703 (-)
ENSDARG00000100398	pax7a	11: 41242644 ~ 41372948 (+)
ENSDARG00000101954	hoxc6b	11: 2198831 ~ 2204754 (+)
ENSDARG00000011407	col2a1b	11: 32007 ~ 55224 (-)
ENSDARG00000089569	pstpip2	10: 8101729 ~ 8142213 (+)
ENSDARG00000014329	npm1a	10: 22034477 ~ 22045119 (+)
ENSDARG00000036670	aplnrb	10: 8629275 ~ 8631361 (+)
ENSDARG00000091419	nrarpa	10: 10860759 ~ 10864331 (-)
ENSDARG00000026531	alcama	10: 28731749 ~ 28835812 (-)
ENSDARG00000057004	si:ch211-287a12.9	10: 24682307 ~ 24689725 (-)
ENSDARG00000043182	hhla2a.1	10: 35417099 ~ 35437624 (+)
ENSDARG00000091726	aebp1	10: 2807136 ~ 2838190 (+)
ENSDARG00000100729	tln1	10: 6121558 ~ 6313905 (+)
ENSDARG00000056985	tpte	10: 24690534 ~ 24707956 (+)
ENSDARG00000009401	vcanb	10: 43188678 ~ 43263885 (+)
ENSDARG00000102300	ca9	10: 6417356 ~ 6454386 (-)
ENSDARG00000099840	lpar1	10: 13000370 ~ 13064110 (+)
ENSDARG00000014796	wnt11	10: 32104305 ~ 32123204 (+)
ENSDARG00000045695	myca	24: 10413484 ~ 10416284 (+)
ENSDARG00000019137	tram1	24: 14214831 ~ 14234824 (+)
ENSDARG00000010516	rpl21	24: 21621654 ~ 21627293 (+)
ENSDARG00000094422	si:dkey-12l12.1	24: 11334733 ~ 11346871 (+)
ENSDARG00000018637	sec61g	24: 18444189 ~ 18446604 (-)
ENSDARG00000026165	col11a1a	24: 28764021 ~ 28893303 (-)
ENSDARG00000012013	cpa6	24: 18880254 ~ 18919649 (-)
ENSDARG00000074335	boc	24: 21206243 ~ 21258945 (-)
ENSDARG00000058730	rdh10a	24: 13251480 ~ 13272843 (-)
ENSDARG00000038428	sulf1	24: 19414561 ~ 19588659 (+)
ENSDARG00000087303	cebpd	24: 35564668 ~ 35565927 (+)
ENSDARG00000074715	stk17a	24: 744713 ~ 788777 (+)
ENSDARG00000053152	pcmtd1	24: 35183595 ~ 35219631 (+)
ENSDARG00000041703	rrbp1b	22: 25086567 ~ 25137256 (+)
ENSDARG00000103979	calr3a	22: 4762478 ~ 4769140 (-)
ENSDARG00000055100	cxcl12b	22: 26929554 ~ 26945493 (-)
ENSDARG00000034013	rgmd	22: 19640309 ~ 19646421 (+)
ENSDARG00000011863	ptk7a	22: 38394502 ~ 38459454 (-)
ENSDARG00000100588	rpl36	22: 3153876 ~ 3159456 (+)
ENSDARG00000071555	zgc:153675	22: 812848 ~ 817479 (-)
ENSDARG00000023963	tpm4a	22: 15577827 ~ 15602760 (-)
ENSDARG00000044132	ogna	22: 10454603 ~ 10459880 (-)
ENSDARG00000059367	mfap2	22: 22888 ~ 24275 (+)
ENSDARG00000043126	blf	22: 9917007 ~ 9923692 (+)
ENSDARG00000087697	lpl	22: 15624371 ~ 15630421 (+)
ENSDARG00000027310	lsp1a	25: 31323970 ~ 31394515 (+)
ENSDARG00000030110	myod1	25: 31421253 ~ 31423493 (-)
ENSDARG00000092798	ppib	25: 5983430 ~ 5990182 (+)
ENSDARG00000042874	phlda2	25: 23524796 ~ 23526086 (-)
ENSDARG00000102640	pdia3	25: 30343012 ~ 30357027 (-)
ENSDARG00000063895	mt-nd1	MT: 3803 ~ 4777 (+)
ENSDARG00000063905	mt-co1	MT: 6425 ~ 7975 (+)
ENSDARG00000063908	mt-co2	MT: 8130 ~ 8820 (+)
ENSDARG00000063912	mt-co3	MT: 9735 ~ 10520 (+)
ENSDARG00000063924	mt-cyb	MT: 15308 ~ 16448 (+)
ENSDARG00000100757	NA	KN150342.1: 49191 ~ 60563 (-)
--	metrnl	--
--	ac024175.4	--
--	depdc7	--
--	fam212ab	--
--	lratb	--
--	lsp1	--
--	rpl37.1	--
--	sdc3	--
--	sepn1	--
--	si:dkey-81p22.14	--
--	tomm20a.1	--
--	rtkn	--
--	col6a3.1	--
--	si:ch211-101l18.8	--
--	si:dkey-11c5.14	--
--	si:dkey-14o18.1	--
--	ta	--
--	tbx6l	--
--	slc25a5.1	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Somites.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE106587 (WT)	Danio rerio	embryo	3	Somites	baseline	12hpf, 6 somites, wild-type TLAB embryo	ENSDARG00000017917 (her7)	marker	DOI:10.1126/science.aar3131
PRJNA564810 (2dpf)	Danio rerio	embryo	12	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000009438 (myog)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (2dpf)	Danio rerio	embryo	12	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000030110 (myod1)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (2dpf)	Danio rerio	embryo	12	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000079071 (jam2b)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (2dpf)	Danio rerio	embryo	12	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000058996 (jam2a)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (2dpf)	Danio rerio	embryo	12	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000010478 (hsp90aa1.1)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (2dpf)	Danio rerio	embryo	18	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000103443 (vwde)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (2dpf)	Danio rerio	embryo	18	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000105380 (fgl1)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (2dpf)	Danio rerio	embryo	18	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000007891 (meox1)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (2dpf)	Danio rerio	embryo	18	Somites	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000020072 (thbs4b)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (1dpf)	Danio rerio	embryo	11	Somites	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000103443 (vwde)	marker	DOI:10.1093/g3journal/jkac062

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Somites

Distribution of Somites in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

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