GENE ID: ENSDARG00000023963


Symbol Location Gene type Genome version Species
tpm4a 22: 15577827 ~ 15602760 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000023963 (tpm4a), yellow represents other genes.
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  • MARKER



    EXPRESSION


    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Progenitors (cluster: 11)
    Endothelium (cluster: 15)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Chondrocytes (cluster: 4)
    potential marker
    NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Epithelial cells (cluster: 6)
    Cornea (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Eye (endothelial, progenitors) (cluster: 13)
    potential marker
    NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 11)
    potential marker
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 11)
    potential marker
    NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Central support cells (cluster: 9)
    potential marker
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Chondrocytes (cluster: 2)
    potential marker
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 3)
    potential marker
    NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 3)
    potential marker
    NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 3)
    potential marker
    NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Mesoderm (cluster: 9)
    potential marker
    NA
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells Differentiated art.CMs (cluster: 2)
    potential marker
    NA
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells Differentiated art.ventricle (cluster: 4)
    potential marker
    NA
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Melanoma cells (cluster: 4)
    potential marker
    NA
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Melanoma cells (cluster: 2)
    potential marker
    NA
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Cardiac mesoderm (cluster: 5)
    potential marker
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Cranial neural crest (cluster: 1)
    Enteric smooth muscle (cluster: 15)
    Endothelium (cluster: 21)
    Enteric smooth muscle (cluster: 23)
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Somites (cluster: 18)
    Cranial neural crest (cluster: 19)
    Cranial neural crest (cluster: 27)
    Chondrocytes (cluster: 5)
    Cranial neural crest (cluster: 6)
    potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Somites (cluster: 11)
    Endothelium (cluster: 16)
    Cranial neural crest (cluster: 3)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Epithelialized macrophages (cluster: 2)
    Epithelialized macrophages (cluster: 3)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Mesoderm (cluster: 7)
    Heart primordium (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Mesoderm (cluster: 7)
    potential marker
    NA
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Pectoral fin (cluster: 11)
    Mesoderm (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Mesoderm (cluster: 10)
    potential marker
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Neural crest (cluster: 4)
    potential marker
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Pharyngeal arch (cluster: 2)
    Chondrocytes (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment Pharyngeal arch (cluster: 3)
    potential marker
    NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Pectoral fin (cluster: 2)
    potential marker
    NA
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Heart primordium (cluster: 2)
    potential marker
    NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Heart primordium (cluster: 2)
    potential marker
    NA
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Heart primordium (cluster: 10)
    potential marker
    NA
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Heart primordium (cluster: 7)
    potential marker
    NA
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Heart primordium (cluster: 5)
    potential marker
    NA
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Heart primordium (cluster: 4)
    potential marker
    NA
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Cardiomyocytes (cluster: 1)
    Cardiomyocytes (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Smooth muscle cells (cluster: 6)
    potential marker
    NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Endothelium (cluster: 9)
    potential marker
    NA
    GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC Endothelium (cluster: 7)
    potential marker
    NA
    GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC Endothelium (cluster: 3)
    potential marker
    NA
    GSE123241 (fgf3 mutants) neuromast regeneration 5dpf, fgf3 mutants during sensory hair cell regeneration, lateral line sensory
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Basal cells (cluster: 2)
    potential marker
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Basal cells (cluster: 4)
    potential marker
    NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Basal cells (cluster: 6)
    potential marker
    NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Prop1+ group (cluster: 9)
    potential marker
    NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis Endothelium (cluster: 13)
    potential marker
    NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Smooth muscle cells (cluster: 3)
    potential marker
    NA
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Muller glia cells (cluster: 5)
    Amacrine cells (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment Muller glia cells (cluster: 10)
    potential marker
    NA
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Muscle cells (cluster: 6)
    potential marker
    NA
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Fibroblasts (cluster: 5)
    Vascular endothelium (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Smooth muscle cells (cluster: 11)
    Smooth muscle cells (cluster: 22)
    potential marker
    potential marker
    NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Chondrocytes (cluster: 3)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Chondrocytes (cluster: 2)
    potential marker
    NA
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 9)
    potential marker
    NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
    GSE151354 (wild type) cartilage baseline 21dpf, wild type
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    PRJNA706197 (12hpf) embryo baseline 12hpf, FACS sorted sox10:nEOS cells
    PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo