Fish Single-cell RNA Database

CELL TYPE: Enteric smooth muscle

Distribution of Enteric smooth muscle in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000069388	tmem88b	7: 21787507 ~ 21806454 (+)
ENSDARG00000035629	parvab	7: 65673885 ~ 65706839 (+)
ENSDARG00000017474	zgc:110699	7: 38811800 ~ 38822387 (+)
ENSDARG00000079578	rbpms2b	7: 48252638 ~ 48263633 (-)
ENSDARG00000033466	tagln2	5: 37087583 ~ 37095460 (+)
ENSDARG00000058365	hspb8	5: 15819651 ~ 15840485 (+)
ENSDARG00000039436	il13ra2	5: 37101393 ~ 37117778 (-)
ENSDARG00000104100	bmpr1ba	5: 7488064 ~ 7712160 (-)
ENSDARG00000020924	myo1ca	5: 37785152 ~ 37817140 (+)
ENSDARG00000041065	hspb1	5: 3568016 ~ 3584815 (-)
ENSDARG00000057706	si:ch211-137i24.10	5: 24165141 ~ 24174956 (-)
ENSDARG00000011239	ppp1r14aa	5: 36730726 ~ 36739509 (+)
ENSDARG00000059442	smtnb	5: 69289990 ~ 69316206 (-)
ENSDARG00000026582	iscub	5: 31860043 ~ 31868847 (+)
ENSDARG00000093303	ifitm1	5: 33258289 ~ 33259079 (-)
ENSDARG00000058819	nog1	3: 10310090 ~ 10312232 (-)
ENSDARG00000040526	s1pr5a	3: 19364948 ~ 19368435 (-)
ENSDARG00000054942	lgals2a	3: 28953274 ~ 28961518 (+)
ENSDARG00000014646	aoc2	3: 32924185 ~ 32934359 (-)
ENSDARG00000105223	pmp22a	3: 50861176 ~ 50865079 (-)
ENSDARG00000005221	desmb	6: 13871641 ~ 13891727 (-)
ENSDARG00000023578	lpp	6: 28294113 ~ 28690670 (+)
ENSDARG00000105112	ntn1a	6: 19804048 ~ 19926657 (-)
ENSDARG00000002644	rgs5a	6: 35387367 ~ 35439406 (-)
ENSDARG00000008494	myl6	6: 39874177 ~ 39893526 (-)
ENSDARG00000056178	dpt	6: 29184137 ~ 29195642 (-)
ENSDARG00000009782	myh11a	6: 8499865 ~ 8580858 (-)
ENSDARG00000004753	mylkb	6: 13458257 ~ 13498745 (-)
ENSDARG00000030980	csrp1b	6: 54838269 ~ 54845622 (-)
ENSDARG00000024006	rprmb	6: 13333133 ~ 13334222 (+)
ENSDARG00000008030	myl9b	6: 1787160 ~ 1799561 (+)
ENSDARG00000058734	prdx1	2: 6104378 ~ 6115688 (-)
ENSDARG00000055498	si:ch1073-184j22.1	2: 5371492 ~ 5389696 (+)
ENSDARG00000053358	basp1	2: 42724404 ~ 42748657 (+)
ENSDARG00000017195	foxf2a	2: 713080 ~ 716426 (-)
ENSDARG00000019128	tpm4b	2: 55300425 ~ 55337585 (-)
ENSDARG00000006526	fn1b	1: 5504128 ~ 5543065 (-)
ENSDARG00000036371	acta1a	1: 53945934 ~ 53953532 (+)
ENSDARG00000002937	meis1a	1: 51475094 ~ 51525086 (+)
ENSDARG00000011023	pdlim3a	1: 17721853 ~ 17735861 (-)
ENSDARG00000011876	ednraa	1: 36612660 ~ 36702355 (+)
ENSDARG00000053542	kctd12.2	1: 34295925 ~ 34297403 (+)
ENSDARG00000008305	hand2	1: 38193147 ~ 38195012 (-)
ENSDARG00000013787	gucy1a1	1: 25783801 ~ 25799051 (+)
ENSDARG00000055009	col4a1	9: 8634229 ~ 8670158 (-)
ENSDARG00000104110	col4a2	9: 8761099 ~ 8882901 (+)
ENSDARG00000060280	pde9a	9: 19421841 ~ 19477248 (+)
ENSDARG00000042018	fhl2a	9: 6578580 ~ 6601988 (+)
ENSDARG00000020845	tns1b	9: 47436010 ~ 47654204 (-)
ENSDARG00000077777	tmsb4x	9: 54178475 ~ 54180059 (+)
ENSDARG00000034801	mylka	9: 4024250 ~ 4075620 (-)
ENSDARG00000099014	fxyd1	16: 45202602 ~ 45225520 (-)
ENSDARG00000016837	glipr2l	16: 27614989 ~ 27622183 (+)
ENSDARG00000058548	bves	16: 7662609 ~ 7681144 (+)
ENSDARG00000090552	si:dkey-7j14.6	16: 43028079 ~ 43041450 (-)
ENSDARG00000034643	fhl3a	16: 33655890 ~ 33736831 (+)
ENSDARG00000099491	tmem176l.1	16: 46518114 ~ 46525155 (-)
ENSDARG00000029112	gem	16: 26766423 ~ 26769327 (+)
ENSDARG00000057911	NA	20: 9970786 ~ 9980318 (-)
ENSDARG00000005789	enpp1	20: 13403281 ~ 13521010 (+)
ENSDARG00000021172	cyp2ad2	20: 25534669 ~ 25542183 (-)
ENSDARG00000022650	cyp2ad3	20: 25548425 ~ 25551676 (-)
ENSDARG00000015611	rasl11b	20: 23022985 ~ 23026223 (-)
ENSDARG00000052336	ociad2	20: 23238833 ~ 23244193 (+)
ENSDARG00000009134	hlx1	20: 52195525 ~ 52199311 (-)
ENSDARG00000040009	palld	20: 23498255 ~ 23649028 (+)
ENSDARG00000057322	tmem47	8: 18565904 ~ 18582922 (-)
ENSDARG00000056111	lmod1a	8: 28297066 ~ 28304534 (-)
ENSDARG00000019990	cabp1a	8: 39890186 ~ 39952727 (-)
ENSDARG00000052045	ggt5a	8: 39998467 ~ 40031011 (+)
ENSDARG00000037476	sorbs3	8: 38318357 ~ 38406868 (-)
ENSDARG00000058302	sh3bgrl	14: 9405099 ~ 9420911 (-)
ENSDARG00000056627	cxcl14	14: 24400799 ~ 24410673 (-)
ENSDARG00000071498	fhl1a	14: 31651533 ~ 31668498 (+)
ENSDARG00000039095	nkx2.3	13: 40409215 ~ 40411917 (-)
ENSDARG00000039579	cfd	13: 13681681 ~ 13684334 (+)
ENSDARG00000103435	sorbs1	13: 23132666 ~ 23226460 (+)
ENSDARG00000007219	actn1	13: 36321088 ~ 36391502 (-)
ENSDARG00000055618	acta1b	13: 24279021 ~ 24284442 (+)
ENSDARG00000069752	ckba	13: 15682075 ~ 15702736 (-)
ENSDARG00000052783	cdc42ep3	13: 42124566 ~ 42143637 (+)
ENSDARG00000040362	ehd2b	18: 44649804 ~ 44663244 (+)
ENSDARG00000045180	acta2	12: 17100021 ~ 17116481 (+)
ENSDARG00000053528	nog3	12: 32388860 ~ 32390444 (+)
ENSDARG00000061259	sost	12: 27331324 ~ 27335652 (+)
ENSDARG00000102995	rbm24a	19: 46113828 ~ 46148977 (+)
ENSDARG00000104478	cap2	19: 46158078 ~ 46210904 (+)
ENSDARG00000104315	fhl3b	19: 4089494 ~ 4118375 (-)
ENSDARG00000076126	actc1a	19: 47549568 ~ 47555956 (-)
ENSDARG00000043102	lxn	15: 1179876 ~ 1198886 (-)
ENSDARG00000045408	tagln	15: 543744 ~ 551181 (-)
ENSDARG00000017710	ppp1r14ab	15: 20204628 ~ 20233105 (-)
ENSDARG00000069464	cox7a1	15: 20403084 ~ 20405796 (+)
ENSDARG00000068257	kcne4	15: 43093044 ~ 43100399 (+)
ENSDARG00000006603	csrp1a	23: 5765514 ~ 5818992 (-)
ENSDARG00000070681	c1qtnf12	23: 24705424 ~ 24750935 (+)
ENSDARG00000038123	myl9a	23: 42810055 ~ 42823356 (+)
ENSDARG00000074201	flna	23: 19759128 ~ 19809027 (+)
ENSDARG00000033738	zgc:153867	23: 28374458 ~ 28388513 (+)
ENSDARG00000011459	gsna	21: 17572421 ~ 17603218 (-)
ENSDARG00000044975	krt94	11: 11468566 ~ 11471857 (-)
ENSDARG00000057575	pnp4a	11: 24251141 ~ 24299538 (+)
ENSDARG00000018966	cyb5r1	11: 24786378 ~ 24799675 (+)
ENSDARG00000026985	lims1	11: 33598213 ~ 33618612 (-)
ENSDARG00000077261	lmod1b	11: 24889170 ~ 24894907 (+)
ENSDARG00000061436	col6a2	11: 33921358 ~ 33960318 (-)
ENSDARG00000074908	col6a1	11: 33996526 ~ 34065718 (-)
ENSDARG00000098431	comp	11: 6941389 ~ 6974022 (-)
ENSDARG00000053381	plpp1a	10: 8265972 ~ 8295342 (-)
ENSDARG00000057678	sfrp1b	10: 20351413 ~ 20357013 (-)
ENSDARG00000100729	tln1	10: 6121558 ~ 6313905 (+)
ENSDARG00000056964	ilk	10: 24722580 ~ 24759616 (-)
ENSDARG00000104682	tpm2	10: 6318227 ~ 6375394 (+)
ENSDARG00000074652	smtna	10: 7875076 ~ 7892192 (-)
ENSDARG00000045302	smpx	24: 25467465 ~ 25500712 (+)
ENSDARG00000059362	cavin1b	24: 7631797 ~ 7668158 (+)
ENSDARG00000043066	nog2	24: 38814734 ~ 38816725 (-)
ENSDARG00000058601	gdap1	24: 14713776 ~ 14725763 (+)
ENSDARG00000104801	tubb6	24: 2941000 ~ 2947406 (-)
ENSDARG00000098761	rgs2	22: 24246213 ~ 24248420 (-)
ENSDARG00000023963	tpm4a	22: 15577827 ~ 15602760 (-)
ENSDARG00000109371	pdgfaa	22: 26085343 ~ 26100282 (-)
ENSDARG00000018566	flnca	25: 35019693 ~ 35041057 (+)
ENSDARG00000096995	fbxl22	25: 26727104 ~ 26736088 (-)
ENSDARG00000045930	rbpms2a	25: 6122823 ~ 6153077 (+)
ENSDARG00000086391	cald1b	25: 20140926 ~ 20211831 (+)
ENSDARG00000087402	tpm1	25: 33192404 ~ 33250323 (+)
--	c6.1	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Enteric smooth muscle.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
PRJNA564810 (5dpf)	Danio rerio	embryo	15	Enteric smooth muscle	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000045180 (acta2)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (5dpf)	Danio rerio	embryo	15	Enteric smooth muscle	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000045408 (tagln)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (5dpf)	Danio rerio	embryo	23	Enteric smooth muscle	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000045180 (acta2)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (5dpf)	Danio rerio	embryo	23	Enteric smooth muscle	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000045408 (tagln)	marker	DOI:10.1093/g3journal/jkac062

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Enteric smooth muscle

Distribution of Enteric smooth muscle in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences