GENE ID: ENSDARG00000104181

Symbol Location Gene type Genome version Species
tmsb1 14: 12066695 ~ 12071679 (-) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION

Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled) Enveloping layer cells (cluster: 7)
 marker
 DOI:10.1038/s41467-021-23834-1
GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled) Enveloping layer cells (cluster: 8)
 marker
 DOI:10.1038/s41467-021-23834-1
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells SHFP (cluster: 10)
 marker
 DOI:10.1242/dev.185652
GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells SHFP (cluster: 10)
 marker
 DOI:10.1242/dev.185652
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Microglia (cluster: 18)
Hyp (cluster: 3)
 potential marker
potential marker
 NA
NA
GSE151354 (wild type) cartilage baseline 21dpf, wild type Hypertrophic chondrocyte (cluster: 5)
 potential marker
 NA
GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant Melanoma cells (cluster: 7)
 potential marker
 NA
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epithelial cells (cluster: 12)
Myeloid cells (cluster: 6)
Myeloid cells (cluster: 8)
Epidermal cells (cluster: 9)
 potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 4)
Myeloid cells (cluster: 7)
 potential marker
potential marker
 NA
NA
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Epidermal cells (cluster: 12)
Epidermal cells (cluster: 5)
Epidermal cells (cluster: 8)
 potential marker
potential marker
potential marker
 NA
NA
NA
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Epidermal cells (cluster: 11)
Epidermal cells (cluster: 13)
Epidermal cells (cluster: 7)
 potential marker
potential marker
potential marker
 NA
NA
NA
GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Immune cells (cluster: 5)
 potential marker
 NA
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
Macrophages (cluster: 7)
 potential marker
potential marker
 NA
NA
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
Macrophages (cluster: 8)
 potential marker
potential marker
 NA
NA
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
 potential marker
 NA
PRJNA734348 (dome, control) embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 6)
 potential marker
 NA
PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 5)
 potential marker
 NA
PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 4)
 potential marker
 NA
PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV) Enveloping layer cells (cluster: 5)
 potential marker
 NA
PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Skin (cluster: 10)
NaR ionocytes (cluster: 11)
KS ionocytes (cluster: 15)
HR ionocytes (cluster: 5)
 potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells Epithelial cells (cluster: 2)
 potential marker
 NA
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 13)
Intesinal epithelial cells (cluster: 17)
Periderm cells (cluster: 4)
Epidermal cells (cluster: 9)
 potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 13)
Epidermal cells (cluster: 15)
Epidermal cells (cluster: 16)
 potential marker
potential marker
potential marker
 NA
NA
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 12)
Epidermal cells (cluster: 14)
Epidermal cells (cluster: 22)
Integument Ionocyte (cluster: 27)
 potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Epithelialized macrophages (cluster: 2)
 potential marker
 NA
PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Macrophages (cluster: 6)
Coronary endothelial cells (cluster: 7)
 potential marker
potential marker
 NA
NA
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Neutrophils (cluster: 10)
Coronary endothelial cells (cluster: 11)
Macrophages (cluster: 2)
Macrophages (cluster: 6)
 potential marker
potential marker
potential marker
potential marker
 NA
NA
NA
NA
PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Macrophages (cluster: 1)
Fibroblasts (cluster: 11)
Coronary endothelial cells (cluster: 9)
 potential marker
potential marker
potential marker
 NA
NA
NA
PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Macrophages (cluster: 6)
 potential marker
 NA
PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Macrophages (cluster: 5)
Coronary endothelial cells (cluster: 8)
Neutrophils (cluster: 9)
 potential marker
potential marker
potential marker
 NA
NA
NA
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 2)
 potential marker
 NA
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Coronary endothelial cells (cluster: 10)
Macrophages (cluster: 2)
 potential marker
potential marker
 NA
NA
PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Coronary endothelial cells (cluster: 10)
Macrophages (cluster: 6)
 potential marker
potential marker
 NA
NA
PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood Granule cells (cluster: 14)
Macrophages (cluster: 9)
 potential marker
potential marker
 NA
NA
PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Neuron (cluster: 2)
 potential marker
 NA
GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Epithelial cells (cluster: 11)
 potential marker
 NA
GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS Epithelial cells (cluster: 4)
 potential marker
 NA
GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS Epithelial cells (cluster: 4)
 potential marker
 NA
GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS Epithelial cells (cluster: 8)
 potential marker
 NA
GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA Epithelial cells (cluster: 5)
 potential marker
 NA
GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Immune cells (cluster: 7)
 potential marker
 NA
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC Immune cells (cluster: 9)
 potential marker
 NA
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae Epidermal cells (cluster: 1)
Epidermal cells (cluster: 4)
Epidermal cells (cluster: 6)
 potential marker
potential marker
potential marker
 NA
NA
NA
PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae Epidermal cells (cluster: 2)
 potential marker
 NA
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Basal cells (cluster: 2)
Endothelium (cluster: 7)
 potential marker
potential marker
 NA
NA
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Basal cells (cluster: 4)
Endothelium (cluster: 7)
 potential marker
potential marker
 NA
NA
PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Basal cells (cluster: 6)
Endothelium (cluster: 7)
 potential marker
potential marker
 NA
NA