Fish Single-cell RNA Database

CELL TYPE: Hypertrophic chondrocyte

Distribution of Hypertrophic chondrocyte in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000016691	cd9b	4: 4234994 ~ 4261673 (-)
ENSDARG00000016526	gata3	4: 25054510 ~ 25064510 (-)
ENSDARG00000102335	ano1	7: 54323944 ~ 54430505 (-)
ENSDARG00000003808	aqp3a	5: 43006422 ~ 43011814 (+)
ENSDARG00000035533	tacr1a	5: 28160503 ~ 28213627 (+)
ENSDARG00000011956	dlx4a	3: 34670076 ~ 34681421 (+)
ENSDARG00000028027	trim63a	6: 15651977 ~ 15653494 (-)
ENSDARG00000052633	si:ch211-106n13.3	2: 49987088 ~ 50053006 (-)
ENSDARG00000079191	zgc:172122	1: 34763539 ~ 34807059 (+)
ENSDARG00000034785	dachb	1: 10378706 ~ 10496809 (+)
ENSDARG00000038941	ppp1r1c	9: 44430705 ~ 44489978 (+)
ENSDARG00000058733	ihha	9: 7358749 ~ 7367278 (+)
ENSDARG00000079964	dlx2a	9: 3397407 ~ 3400729 (-)
ENSDARG00000013125	dlx1a	9: 3388099 ~ 3390109 (+)
ENSDARG00000061242	tuft1a	16: 22363700 ~ 22385705 (-)
ENSDARG00000089441	si:ch211-105c13.3	16: 22695211 ~ 22713192 (-)
ENSDARG00000084546	BX248082.1	16: 16154324 ~ 16154458 (+)
ENSDARG00000042010	pklr	16: 54450407 ~ 54455573 (-)
ENSDARG00000042953	cyp2n13	20: 25515259 ~ 25522911 (-)
ENSDARG00000021172	cyp2ad2	20: 25534669 ~ 25542183 (-)
ENSDARG00000073814	pax1b	20: 48694056 ~ 48701593 (-)
ENSDARG00000092035	si:ch211-156j16.1	8: 26818446 ~ 26838845 (+)
ENSDARG00000053646	adrb3a	8: 37700090 ~ 37738751 (+)
ENSDARG00000042816	mmp9	8: 24281512 ~ 24295947 (+)
ENSDARG00000078052	emilin3a	8: 22962690 ~ 22965916 (-)
ENSDARG00000054753	col10a1a	17: 15542077 ~ 15546862 (-)
ENSDARG00000086305	si:ch211-63b16.4	17: 24006792 ~ 24017300 (+)
ENSDARG00000104181	tmsb1	14: 12066695 ~ 12071679 (-)
ENSDARG00000056627	cxcl14	14: 24400799 ~ 24410673 (-)
ENSDARG00000029443	zgc:92242	14: 8043441 ~ 8080416 (-)
ENSDARG00000058206	si:ch211-153b23.5	14: 11457500 ~ 11461002 (+)
ENSDARG00000073820	zgc:174917	14: 11504504 ~ 11507426 (-)
ENSDARG00000089368	hopx	14: 1170968 ~ 1178359 (+)
ENSDARG00000020656	prkg1a	13: 40815012 ~ 40955599 (+)
ENSDARG00000057671	epas1b	13: 8375612 ~ 8446341 (-)
ENSDARG00000025089	loxl4	13: 40182487 ~ 40238813 (-)
ENSDARG00000008133	foxl1	18: 17483557 ~ 17485419 (-)
ENSDARG00000054451	loxl1	18: 50124297 ~ 50152689 (-)
ENSDARG00000022437	cd81b	18: 27318589 ~ 27336157 (+)
ENSDARG00000033999	cyp26a1	12: 8954761 ~ 8958353 (-)
ENSDARG00000014626	dlx3b	12: 5708400 ~ 5711920 (+)
ENSDARG00000078417	plxdc1	12: 15363463 ~ 15461462 (+)
ENSDARG00000060893	col8a2	19: 35496282 ~ 35596207 (-)
ENSDARG00000042296	dlx5a	19: 41470216 ~ 41472228 (-)
ENSDARG00000099420	nme2b.2	19: 48111285 ~ 48114444 (+)
ENSDARG00000100794	mmp13b	15: 33825750 ~ 33834577 (-)
ENSDARG00000101959	etv1	15: 34172371 ~ 34214440 (-)
ENSDARG00000020606	nfe2	23: 36311581 ~ 36316352 (-)
ENSDARG00000018179	acvrl1	23: 27835647 ~ 27857104 (-)
ENSDARG00000044276	spp1	10: 15120711 ~ 15128771 (-)
ENSDARG00000027088	ptgdsb.1	24: 17027310 ~ 17029374 (-)
ENSDARG00000062363	phex	24: 25404358 ~ 25442346 (-)
ENSDARG00000071626	ptgdsb.2	24: 17021513 ~ 17023392 (-)
ENSDARG00000109460	CR762420.1	KN149685.1: 52649 ~ 59470 (-)
--	krt18	--
--	adgrg1.1	--
--	si:ch211-63p21.2	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Hypertrophic chondrocyte.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE151354 (wild type)	Danio rerio	cartilage	5	Hypertrophic chondrocyte	baseline	21dpf, wild type	ENSDARG00000054753 (col10a1a)	marker	DOI:10.7554/eLife.16415
GSE151354 (wild type)	Danio rerio	cartilage	7	Hypertrophic chondrocyte	baseline	21dpf, wild type	ENSDARG00000054753 (col10a1a)	marker	DOI:10.7554/eLife.16415
GSE151354 (wild type)	Danio rerio	cartilage	7	Hypertrophic chondrocyte	baseline	21dpf, wild type	ENSDARG00000044276 (spp1)	marker	DOI:10.1242/dev.193409
GSE151354 (nkx3.2 mutant)	Danio rerio	cartilage	10	Hypertrophic chondrocyte	growth	21dpf, nkx3.2 mutant	ENSDARG00000054753 (col10a1a)	marker	DOI:10.7554/eLife.16415
GSE151354 (nkx3.2 mutant)	Danio rerio	cartilage	10	Hypertrophic chondrocyte	growth	21dpf, nkx3.2 mutant	ENSDARG00000044276 (spp1)	marker	DOI:10.1242/dev.193409

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Hypertrophic chondrocyte

Distribution of Hypertrophic chondrocyte in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences