GENE ID: ENSDARG00000016691

Symbol Location Gene type Genome version Species
cd9b 4: 4234994 ~ 4261673 (-) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000016691 (cd9b), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epidermal cells (cluster: 9)
    		 marker
    		 DOI:10.1016/j.cell.2008.01.025
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epidermal cells (cluster: 16)
    		 marker
    		 DOI:10.1016/j.cell.2008.01.025
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Periderm cells (cluster: 4)
    		 marker
    		 DOI:10.1093/g3journal/jkac062
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Epithelial cells (cluster: 5)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS Epithelial cells (cluster: 4)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS Epithelial cells (cluster: 2)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA Epithelial cells (cluster: 5)
    		 marker
    		 DOI:10.1038/s41586-021-03484-5
    GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC Epidermal cells (cluster: 7)
    		 marker
    		 DOI:10.1242/bio.047829
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Epidermal cells (cluster: 10)
    		 marker
    		 DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 8)
    		 marker
    		 DOI:10.1182/bloodadvances.2020003969
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Epidermal cells (cluster: 13)
    		 marker
    		 DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 10)
    		 marker
    		 DOI:10.1182/bloodadvances.2020003969
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 9)
    Epidermal cells (cluster: 12)
    		 marker
    marker
    		 DOI:10.1182/bloodadvances.2020003969
    DOI:10.1182/bloodadvances.2020003969
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Microglia (cluster: 18)
    Cranial ganglion (cluster: 22)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Oligodendrocytes (cluster: 5)
    		 potential marker
    		 NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Eye (cluster: 13)
    		 potential marker
    		 NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Eye (cluster: 17)
    		 potential marker
    		 NA
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant Hypertrophic chondrocyte (cluster: 10)
    		 potential marker
    		 NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Epidermal cells (cluster: 12)
    Periderm cells (cluster: 16)
    Immune cells (cluster: 20)
    Epidermal cells (cluster: 5)
    Epidermal cells (cluster: 8)
    		 potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Epidermal cells (cluster: 11)
    Epidermal cells (cluster: 13)
    Periderm cells (cluster: 16)
    Immune cells (cluster: 20)
    Epidermal cells (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
    		 potential marker
    		 NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
    		 potential marker
    		 NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
    		 potential marker
    		 NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Endoderm (cluster: 10)
    Epidermal cells (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo EVL, Periderm (cluster: 3)
    		 potential marker
    		 NA
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells SHFP (cluster: 10)
    		 potential marker
    		 NA
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells SHFP (cluster: 10)
    		 potential marker
    		 NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos NaR ionocytes (cluster: 11)
    		 potential marker
    		 NA
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Otic (cluster: 10)
    		 potential marker
    		 NA
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells Epithelial cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells Epithelial cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Epithelial cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 13)
    Epidermal cells (cluster: 15)
    Epidermal cells (cluster: 16)
    Optic vesicle (cluster: 22)
    		 potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 12)
    Epidermal cells (cluster: 14)
    Epidermal cells (cluster: 22)
    Mucous secreting cells (cluster: 24)
    Integument Ionocyte (cluster: 27)
    		 potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Epithelialized macrophages (cluster: 12)
    Epithelialized macrophages (cluster: 3)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Epidermal cells (cluster: 10)
    Placode (cluster: 6)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Epidermal cells (cluster: 6)
    		 potential marker
    		 NA
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Pharyngeal endoderm (cluster: 10)
    Epidermal cells (cluster: 12)
    Placode (cluster: 13)
    Periderm cells (cluster: 14)
    Placode (cluster: 5)
    		 potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Epidermal cells (cluster: 11)
    Epidermal cells (cluster: 12)
    Placode (cluster: 4)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Periderm cells (cluster: 11)
    Epidermal cells (cluster: 3)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Epidermal cells (cluster: 5)
    Epidermal cells (cluster: 7)
    Periderm cells (cluster: 8)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Epidermal cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment Epidermal cells (cluster: 5)
    		 potential marker
    		 NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Epidermal cells (cluster: 4)
    Periderm cells (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Coronary endothelial cells (cluster: 5)
    Macrophages (cluster: 6)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 5)
    		 potential marker
    		 NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas duct epithelial cells (cluster: 7)
    		 potential marker
    		 NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Oligodendrocytes (cluster: 15)
    Oligodendrocyte precursor cells (cluster: 8)
    		 potential marker
    potential marker