Fish Single-cell RNA Database

CELL TYPE: Astrocyte

Distribution of Astrocyte in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000016691	cd9b	4: 4234994 ~ 4261673 (-)
ENSDARG00000079824	ninj2	4: 8168514 ~ 8208654 (+)
ENSDARG00000087196	fibinb	7: 34290051 ~ 34293073 (+)
ENSDARG00000090615	cd59	7: 38695719 ~ 38698664 (-)
ENSDARG00000105344	pkd1l2a	7: 65177132 ~ 65236649 (-)
ENSDARG00000019098	cd82a	7: 26709251 ~ 26739674 (+)
ENSDARG00000001234	map4k2	7: 17648931 ~ 17690983 (-)
ENSDARG00000018312	rell1	7: 61230013 ~ 61279523 (-)
ENSDARG00000068262	vamp5	5: 28297250 ~ 28307470 (+)
ENSDARG00000101380	cryabb	5: 57641554 ~ 57650998 (+)
ENSDARG00000011929	plp1b	5: 23268121 ~ 23280098 (-)
ENSDARG00000058128	msna	5: 22133153 ~ 22174037 (+)
ENSDARG00000011239	ppp1r14aa	5: 36730726 ~ 36739509 (+)
ENSDARG00000035553	cx27.5	5: 23622177 ~ 23628166 (+)
ENSDARG00000035338	tppp2	5: 37056818 ~ 37065741 (+)
ENSDARG00000112032	NA	5: 58397646 ~ 58412538 (+)
ENSDARG00000077467	sox10	3: 1492174 ~ 1501255 (+)
ENSDARG00000088967	wnk4b	3: 22432069 ~ 22551356 (+)
ENSDARG00000094695	si:dkey-204f11.64	3: 34140507 ~ 34147100 (+)
ENSDARG00000042357	cldnk	3: 50123507 ~ 50127668 (-)
ENSDARG00000003081	mybphb	6: 55032439 ~ 55082533 (+)
ENSDARG00000095896	pou3f3b	6: 14949950 ~ 14953352 (+)
ENSDARG00000013576	gadd45bb	2: 36939749 ~ 36941988 (+)
ENSDARG00000053358	basp1	2: 42724404 ~ 42748657 (+)
ENSDARG00000089109	bcl2b	2: 13185302 ~ 13216269 (-)
ENSDARG00000019541	gpt2l	2: 3533117 ~ 3573000 (+)
ENSDARG00000089477	si:ch211-132g1.3	1: 1870861 ~ 1928122 (-)
ENSDARG00000006427	fabp2	1: 25848231 ~ 25851575 (+)
ENSDARG00000102858	sc:d189	1: 35194454 ~ 35234700 (+)
ENSDARG00000014348	stk17b	9: 24192370 ~ 24201159 (+)
ENSDARG00000054583	mfsd6b	9: 41482831 ~ 41507712 (-)
ENSDARG00000070155	tuba8l3	9: 7662638 ~ 7673856 (-)
ENSDARG00000004930	lmo7a	9: 21893757 ~ 21970067 (-)
ENSDARG00000040946	olig2	9: 32751428 ~ 32753535 (-)
ENSDARG00000061242	tuft1a	16: 22363700 ~ 22385705 (-)
ENSDARG00000040295	apoeb	16: 23960744 ~ 23963461 (+)
ENSDARG00000089413	mbpb	16: 6803342 ~ 6849781 (-)
ENSDARG00000077176	zgc:174888	16: 13855039 ~ 13859164 (+)
ENSDARG00000040291	cadm4	16: 24213078 ~ 24518040 (-)
ENSDARG00000011602	NA	20: 25659839 ~ 25709349 (-)
ENSDARG00000023443	tjp2b	8: 11425048 ~ 11542289 (+)
ENSDARG00000068575	tmem51a	8: 26701038 ~ 26709959 (-)
ENSDARG00000089418	si:dkey-164f24.2	8: 32481577 ~ 32497815 (-)
ENSDARG00000004952	rsad2	17: 35357451 ~ 35361322 (-)
ENSDARG00000030064	plekha1a	17: 21887823 ~ 21913328 (+)
ENSDARG00000061773	neurl1ab	17: 20500229 ~ 20518626 (+)
ENSDARG00000032831	htra1a	17: 21919131 ~ 21959556 (+)
ENSDARG00000021250	slc25a48	14: 25590603 ~ 25599002 (-)
ENSDARG00000074285	si:ch73-335m24.2	14: 33859695 ~ 33872616 (-)
ENSDARG00000010625	clic2	14: 33882973 ~ 33892311 (+)
ENSDARG00000030265	scdb	13: 30007554 ~ 30028103 (-)
ENSDARG00000069529	zgc:153981	13: 24834199 ~ 24837977 (+)
ENSDARG00000006128	cep170aa	13: 10980755 ~ 11072964 (-)
ENSDARG00000057286	swap70b	18: 16876833 ~ 16916840 (-)
ENSDARG00000010018	qki2	12: 34953038 ~ 35019519 (+)
ENSDARG00000089828	si:rp71-19m20.1	12: 11352630 ~ 11371291 (+)
ENSDARG00000004415	tcf7l2	12: 30977736 ~ 31103906 (-)
ENSDARG00000015891	ptprea	12: 43376436 ~ 43576437 (-)
ENSDARG00000036186	mbpa	19: 21814047 ~ 21832630 (-)
ENSDARG00000089878	nedd9	19: 3653976 ~ 3707794 (+)
ENSDARG00000056934	hepacama	15: 22311803 ~ 22325973 (+)
ENSDARG00000104023	mag	15: 33891808 ~ 33933820 (-)
ENSDARG00000089838	si:dkey-262k9.4	15: 36506014 ~ 36533437 (-)
ENSDARG00000024920	tlcd5a	15: 22435460 ~ 22444746 (+)
ENSDARG00000005350	dip2ba	23: 27358722 ~ 27442544 (-)
ENSDARG00000117155	BX323087.1	23: 6333406 ~ 6354179 (-)
ENSDARG00000057121	c7b	21: 20901505 ~ 20915291 (+)
ENSDARG00000077257	timd4	21: 29090652 ~ 29100110 (-)
ENSDARG00000002391	tlcd1	21: 26080215 ~ 26089964 (-)
ENSDARG00000056619	arhgap42a	21: 22738939 ~ 22796064 (+)
ENSDARG00000104470	syngr2b	11: 45159353 ~ 45171208 (-)
ENSDARG00000103735	elovl1b	11: 13094179 ~ 13152524 (-)
ENSDARG00000044569	cldn19	11: 39013763 ~ 39044595 (-)
ENSDARG00000079188	nxph2b	11: 33846440 ~ 33857911 (-)
ENSDARG00000070161	vamp3	11: 39928828 ~ 39956925 (+)
ENSDARG00000053113	ly75	11: 11120532 ~ 11193205 (+)
ENSDARG00000095294	si:dkey-200l5.4	10: 17731293 ~ 17745374 (-)
ENSDARG00000045391	cd226	24: 15114092 ~ 15133886 (-)
ENSDARG00000010008	vim	24: 32176155 ~ 32192681 (+)
ENSDARG00000071454	crp1	24: 38073223 ~ 38079261 (-)
ENSDARG00000002255	epb41l3a	24: 41931585 ~ 41986895 (+)
ENSDARG00000057598	s100b	22: 13846130 ~ 13857729 (-)
ENSDARG00000016598	ckmt1	25: 21829777 ~ 21847553 (+)
--	kcnj11l.1	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Astrocyte.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
PRJNA672101 (nrl-KO)	Danio rerio	retina	18	Astrocyte	growth	5mpf, three retinas from nrl-KO zebrafsih	ENSDARG00000057598 (s100b)	marker	DOI:10.1371/journal.pgen.1009841
PRJNA672101 (nrl-KO)	Danio rerio	retina	18	Astrocyte	growth	5mpf, three retinas from nrl-KO zebrafsih	ENSDARG00000040946 (olig2)	marker	DOI:10.1371/journal.pgen.1009841
PRJNA672101 (nrl-KO)	Danio rerio	retina	18	Astrocyte	growth	5mpf, three retinas from nrl-KO zebrafsih	ENSDARG00000006427 (fabp2)	marker	DOI:10.1371/journal.pgen.1009841
PRJNA672101 (nrl-KO)	Danio rerio	retina	18	Astrocyte	growth	5mpf, three retinas from nrl-KO zebrafsih	ENSDARG00000042357 (cldnk)	marker	DOI:10.1371/journal.pgen.1009841
PRJNA672101 (WT)	Danio rerio	retina	15	Astrocyte	baseline	5mpf, three retinas from WT zebrafsih	ENSDARG00000042357 (cldnk)	marker	DOI:10.1371/journal.pgen.1009841
PRJNA672101 (WT)	Danio rerio	retina	15	Astrocyte	baseline	5mpf, three retinas from WT zebrafsih	ENSDARG00000006427 (fabp2)	marker	DOI:10.1371/journal.pgen.1009841
PRJNA672101 (WT)	Danio rerio	retina	15	Astrocyte	baseline	5mpf, three retinas from WT zebrafsih	ENSDARG00000040946 (olig2)	marker	DOI:10.1371/journal.pgen.1009841

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Astrocyte

Distribution of Astrocyte in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences