GENE ID: ENSDARG00000040295

Symbol Location Gene type Genome version Species
apoeb 16: 23960744 ~ 23963461 (+) protein_coding GRCz11 Danio rerio

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  • Green is ENSDARG00000040295 (apoeb), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Microglia (cluster: 18)
    		 marker
    		 DOI:10.1038/nbt.4103
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Microglia (cluster: 4)
    Radial glia (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Glia (cluster: 12)
    		 potential marker
    		 NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Microglia (cluster: 13)
    		 potential marker
    		 NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Blood,immune cell (cluster: 11)
    		 potential marker
    		 NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Neuron (cluster: 17)
    		 potential marker
    		 NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Epidermal cells (cluster: 8)
    		 potential marker
    		 NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Epidermal cells (cluster: 11)
    		 potential marker
    		 NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 8)
    		 potential marker
    		 NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Endothelium (cluster: 5)
    		 potential marker
    		 NA
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled) Ectoderm cells (cluster: 2)
    		 potential marker
    		 NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Epidermal cells (cluster: 4)
    		 potential marker
    		 NA
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo Epidermal cells (cluster: 8)
    		 potential marker
    		 NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Skin (cluster: 10)
    		 potential marker
    		 NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 9)
    		 potential marker
    		 NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 16)
    		 potential marker
    		 NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 12)
    Epidermal cells (cluster: 22)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Epithelialized macrophages (cluster: 1)
    Epithelialized macrophages (cluster: 2)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Epidermal cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Epidermal cells (cluster: 6)
    		 potential marker
    		 NA
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Epidermal cells (cluster: 12)
    Placode (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Epidermal cells (cluster: 11)
    Epidermal cells (cluster: 12)
    Placode (cluster: 4)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Epidermal cells (cluster: 12)
    Epidermal cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Epidermal cells (cluster: 10)
    Pectoral fin (cluster: 11)
    Epidermal cells (cluster: 7)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Epidermal cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment Epidermal cells (cluster: 5)
    		 potential marker
    		 NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Epidermal cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Smooth muscle cells (cluster: 6)
    		 potential marker
    		 NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Microglia (cluster: 11)
    		 potential marker
    		 NA
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Epithelial cells (cluster: 11)
    Enterocytes (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated Enterocytes (cluster: 2)
    		 potential marker
    		 NA
    GSE150498 (wildtype, untreated) intestine baseline 6dpf, wildtype, untreated Brush border cells (cluster: 8)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, untreated) intestine disease 6dpf, nod2-/-, untreated Brush border cells (cluster: 4)
    		 potential marker
    		 NA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS Brush border cells (cluster: 2)
    Epithelial cells (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS Enterocytes (cluster: 2)
    Epithelial cells (cluster: 4)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE150498 (wildtype, 2X DSS) intestine disease 6dpf, wildtype, 2X DSS Enterocytes (cluster: 1)
    		 potential marker
    		 NA
    GSE150498 (wildtype, 2X DSS+BZA) intestine disease 6dpf, wildtype, 2X DSS+BZA Brush border cells (cluster: 3)
    		 potential marker
    		 NA
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS Brush border cells (cluster: 2)
    Epithelial cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA Brush border cells (cluster: 3)
    Epithelial cells (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Hepatocytes (cluster: 2)
    		 potential marker
    		 NA
    GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC Hepatocytes (cluster: 1)
    		 potential marker
    		 NA
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae Support cells (cluster: 3)
    Epidermal cells (cluster: 6)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae Epidermal cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Basal cells (cluster: 2)
    		 potential marker
    		 NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Basal cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Basal cells (cluster: 6)
    Endothelium (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE148591 (6mpf) pituitary baseline 6mpf, male, Sox17:CreERT2 Prop1+ group (cluster: 9)
    		 potential marker
    		 NA
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis Prop1+ group (cluster: 11)
    		 potential marker
    		 NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Peripheral Neurons (cluster: 12)
    		 potential marker
    		 NA
    GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg Rod opsin (cluster: 4)
    		 potential marker
    		 NA
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Amacrine cells (cluster: 7)
    		 potential marker
    		 NA
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment Retinal ganglion cells (cluster: 8)
    		 potential marker
    		 NA
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment Retinal ganglion cells (cluster: 8)
    Retinal ganglion cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Microglia (cluster: 12)
    Muller glia cells (cluster: 13)
    Astrocyte (cluster: 18)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih Muller glia cells (cluster: 5)
    		 potential marker
    		 NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Non-follicular epithelium (cluster: 5)
    		 potential marker
    		 NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Non-follicular epithelium (cluster: 3)
    		 potential marker
    		 NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Chromaffin cells (cluster: 11)
    		 potential marker
    		 NA
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 8)
    		 potential marker
    		 NA
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases Melanoma cells (cluster: 8)
    		 potential marker
    		 NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Epidermal cells (cluster: 14)
    Epidermal cells (cluster: 29)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Epithelial cells (cluster: 4)
    		 potential marker
    		 NA
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Epithelial cells (cluster: 7)
    		 potential marker
    		 NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- Epithelial cells (cluster: 3)
    		 potential marker
    		 NA
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.