Fish Single-cell RNA Database

CELL TYPE: KS ionocytes

Distribution of KS ionocytes in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000045490	ndufb2	4: 22480169 ~ 22483131 (+)
ENSDARG00000042469	ndufa12	4: 25829841 ~ 25836684 (-)
ENSDARG00000019644	ldhba	4: 16828752 ~ 16836006 (-)
ENSDARG00000039346	ndufa5	4: 4930406 ~ 4932619 (-)
ENSDARG00000078560	slc9a5	7: 34620418 ~ 34653251 (+)
ENSDARG00000007745	uqcrfs1	7: 45400716 ~ 45406089 (+)
ENSDARG00000016687	acadvl	7: 20298333 ~ 20333524 (+)
ENSDARG00000069089	agrp	7: 35080490 ~ 35083585 (-)
ENSDARG00000015385	ndufs3	7: 38588866 ~ 38594602 (+)
ENSDARG00000076386	epdl1	7: 1045637 ~ 1057216 (+)
ENSDARG00000068262	vamp5	5: 28297250 ~ 28307470 (+)
ENSDARG00000104537	cox7c	5: 47726197 ~ 47727819 (-)
ENSDARG00000052462	pisd	5: 57489253 ~ 57528943 (-)
ENSDARG00000052840	ndufs4	5: 40485503 ~ 40501732 (+)
ENSDARG00000015072	dmrt2a	5: 45007962 ~ 45013409 (+)
ENSDARG00000068940	atp5meb	5: 9070382 ~ 9073433 (-)
ENSDARG00000011841	atp5l	5: 30699260 ~ 30701891 (+)
ENSDARG00000012387	pdha1a	5: 24031314 ~ 24044877 (-)
ENSDARG00000099499	ndufa4l	3: 20947560 ~ 20957083 (-)
ENSDARG00000038028	ndufa6	3: 1182315 ~ 1186100 (+)
ENSDARG00000056324	zgc:123295	3: 21189766 ~ 21198744 (+)
ENSDARG00000056008	atp5mc1	3: 23599290 ~ 23604396 (-)
ENSDARG00000094557	nupr1b	3: 15505275 ~ 15506158 (+)
ENSDARG00000054588	cox6a2	3: 31039923 ~ 31042102 (+)
ENSDARG00000037867	atp5mf	3: 40296785 ~ 40301467 (-)
ENSDARG00000101655	sstr5	3: 11101585 ~ 11122914 (+)
ENSDARG00000009040	si:ch73-141c7.1	3: 18023975 ~ 18030938 (-)
ENSDARG00000028889	ndufb10	3: 18405136 ~ 18410968 (-)
ENSDARG00000014915	ndufab1b	3: 35535121 ~ 35541381 (-)
ENSDARG00000014794	uqcrc2a	3: 58167288 ~ 58185030 (+)
ENSDARG00000098355	atp5pd	3: 48549294 ~ 48559906 (-)
ENSDARG00000009447	atp5mc3b	6: 10830844 ~ 10835922 (-)
ENSDARG00000044562	cycsb	6: 10910589 ~ 10912424 (-)
ENSDARG00000059128	uqcrh	6: 3509036 ~ 3514753 (-)
ENSDARG00000019613	ip6k2b	6: 40089743 ~ 40162742 (-)
ENSDARG00000070824	ndufb5	6: 29402997 ~ 29410091 (+)
ENSDARG00000017728	phb2b	6: 29707129 ~ 29714290 (+)
ENSDARG00000090980	apof	6: 39162294 ~ 39167732 (-)
ENSDARG00000095897	atp5f1e	6: 49893488 ~ 49902140 (-)
ENSDARG00000038075	cyc1	6: 50381347 ~ 50390089 (+)
ENSDARG00000038577	cox6c	6: 52235441 ~ 52241529 (+)
ENSDARG00000052304	uqcrc1	6: 22337081 ~ 22351939 (+)
ENSDARG00000095921	si:ch1073-325m22.2	2: 57268781 ~ 57287258 (-)
ENSDARG00000076043	si:dkeyp-73d8.9	2: 32642338 ~ 32643738 (-)
ENSDARG00000013044	ndufv2	2: 54641644 ~ 54690184 (+)
ENSDARG00000007739	atp1a1a.2	1: 1789357 ~ 1796832 (+)
ENSDARG00000030514	acsl1a	1: 17537451 ~ 17587552 (-)
ENSDARG00000076833	atp1b1b	1: 10720294 ~ 10739221 (+)
ENSDARG00000037259	ndufb6	1: 26099250 ~ 26103232 (+)
ENSDARG00000033789	ndufb7	1: 55780128 ~ 55785722 (-)
ENSDARG00000096003	atp5md	1: 49432137 ~ 49434892 (-)
ENSDARG00000014313	atp5pf	1: 610082 ~ 614638 (-)
ENSDARG00000033928	ndfip2	1: 5354489 ~ 5394791 (-)
ENSDARG00000058463	ndufab1a	1: 9118100 ~ 9123465 (-)
ENSDARG00000007786	tmx2b	1: 44569282 ~ 44581937 (-)
ENSDARG00000017772	mdh1aa	1: 50968908 ~ 50990889 (+)
ENSDARG00000052712	suclg1	1: 43652480 ~ 43684584 (-)
ENSDARG00000043719	c3a.6	1: 56036644 ~ 56080165 (-)
ENSDARG00000001788	atp5po	9: 33145522 ~ 33148873 (+)
ENSDARG00000090389	ndufv3	9: 19518674 ~ 19528038 (+)
ENSDARG00000093349	si:ch211-141e20.2	9: 19681569 ~ 19762801 (-)
ENSDARG00000075709	ndufb3	9: 707086 ~ 712308 (-)
ENSDARG00000086842	dap1b	9: 52378484 ~ 52386733 (-)
ENSDARG00000097746	si:rp71-77l1.1	16: 45087810 ~ 45094599 (-)
ENSDARG00000061242	tuft1a	16: 22363700 ~ 22385705 (-)
ENSDARG00000027609	hpn	16: 45249055 ~ 45288599 (-)
ENSDARG00000099117	si:dkey-33i11.4	16: 45228101 ~ 45235947 (-)
ENSDARG00000037860	cox6b2	16: 12504929 ~ 12512593 (-)
ENSDARG00000041400	ndufa3	16: 5717760 ~ 5721386 (-)
ENSDARG00000103199	si:dkey-247k7.2	16: 23339062 ~ 23346095 (-)
ENSDARG00000041314	ndufb9	16: 6386941 ~ 6391275 (-)
ENSDARG00000043257	ckbb	20: 20816747 ~ 20821789 (-)
ENSDARG00000077694	dtnba	20: 47290004 ~ 47348161 (-)
ENSDARG00000020123	coq8aa	20: 38458084 ~ 38519126 (+)
ENSDARG00000092873	zgc:193541	20: 20726231 ~ 20730631 (+)
ENSDARG00000042428	gstt1a	8: 30787111 ~ 30791266 (-)
ENSDARG00000022438	cox6a1	8: 39760258 ~ 39765996 (+)
ENSDARG00000079823	mrps36	8: 17163494 ~ 17167830 (-)
ENSDARG00000011553	atp5pb	8: 25329032 ~ 25338709 (-)
ENSDARG00000019990	cabp1a	8: 39890186 ~ 39952727 (-)
ENSDARG00000036684	ndufa7	8: 47804284 ~ 47811955 (+)
ENSDARG00000003695	vdac3	8: 2412583 ~ 2434287 (-)
ENSDARG00000043467	ndufb11	8: 14180064 ~ 14184423 (-)
ENSDARG00000053217	cox7a2a	17: 49983157 ~ 49995366 (-)
ENSDARG00000097731	CR936482.1	17: 44249608 ~ 44252967 (+)
ENSDARG00000011235	otx2b	17: 44244659 ~ 44249720 (-)
ENSDARG00000103849	mdh1ab	17: 24439532 ~ 24444402 (+)
ENSDARG00000044092	atp5if1b	17: 24613255 ~ 24614724 (+)
ENSDARG00000042840	eml1	17: 30976484 ~ 31082381 (-)
ENSDARG00000104181	tmsb1	14: 12066695 ~ 12071679 (-)
ENSDARG00000009550	foxi3b	14: 34514336 ~ 34516587 (+)
ENSDARG00000101569	ppargc1b	14: 24934736 ~ 25001584 (+)
ENSDARG00000029064	uqcrq	14: 38875078 ~ 38878419 (-)
ENSDARG00000036329	ndufa1	14: 33413980 ~ 33415439 (+)
ENSDARG00000001442	inppl1b	14: 32793272 ~ 32824408 (-)
ENSDARG00000037421	egr1	14: 21332522 ~ 21336385 (-)
ENSDARG00000092553	slc25a5	14: 32881625 ~ 32884138 (-)
ENSDARG00000103101	si:ch211-235e9.6	14: 46114659 ~ 46117345 (-)
ENSDARG00000015759	tspan7	14: 41469478 ~ 41478392 (-)
ENSDARG00000093448	mpc1	13: 281214 ~ 285151 (+)
ENSDARG00000039093	got1	13: 40437550 ~ 40456995 (+)
ENSDARG00000032102	prdx3	13: 9842276 ~ 9851472 (+)
ENSDARG00000013623	vdac2	13: 17714296 ~ 17729474 (-)
ENSDARG00000102040	CR356236.1	13: 27785329 ~ 27804890 (+)
ENSDARG00000069733	mavs	13: 15182149 ~ 15213869 (+)
ENSDARG00000001578	echs1	13: 24579108 ~ 24582236 (+)
ENSDARG00000104084	si:dkey-191g9.7	13: 21689267 ~ 21701323 (-)
ENSDARG00000068738	cox5b2	13: 50375800 ~ 50378038 (+)
ENSDARG00000032970	cox4i1	18: 30507839 ~ 30510241 (+)
ENSDARG00000089060	kcnj1a.5	18: 48499029 ~ 48500545 (-)
ENSDARG00000086248	kcnj1a.3	18: 48515579 ~ 48517040 (-)
ENSDARG00000090866	kcnj1a.2	18: 48498366 ~ 48530221 (-)
ENSDARG00000088484	kcnj1a.6	18: 48491007 ~ 48500545 (-)
ENSDARG00000093207	CR786562.1	18: 48541660 ~ 48553208 (+)
ENSDARG00000058285	cpt1b	18: 8340886 ~ 8367566 (+)
ENSDARG00000003795	idh2	18: 26096814 ~ 26101800 (-)
ENSDARG00000099663	cox5ab	18: 808911 ~ 812753 (+)
ENSDARG00000020876	pdk2a	12: 28559408 ~ 28570989 (-)
ENSDARG00000007294	aco2	12: 19106571 ~ 19119176 (-)
ENSDARG00000054907	cox7a2l	12: 25197383 ~ 25201576 (-)
ENSDARG00000010113	ndufb8	12: 48469755 ~ 48477031 (-)
ENSDARG00000052842	ppifb	12: 48803098 ~ 48811125 (+)
ENSDARG00000011146	uqcrb	19: 44049501 ~ 44055008 (-)
ENSDARG00000006290	ndufs5	19: 35357196 ~ 35361556 (-)
ENSDARG00000016721	sdha	19: 7276060 ~ 7291733 (-)
ENSDARG00000067975	atp5if1a	19: 84052 ~ 85593 (-)
ENSDARG00000032849	ndrg1a	19: 34959967 ~ 34979837 (-)
ENSDARG00000054848	pdk4	19: 41190258 ~ 41213718 (-)
ENSDARG00000101088	si:ch73-359m17.5	19: 48339349 ~ 48340774 (-)
ENSDARG00000036438	ndufv1	19: 9212031 ~ 9228512 (+)
ENSDARG00000056583	ndufs6	19: 28281201 ~ 28283877 (-)
ENSDARG00000098011	BX000438.2	15: 30922926 ~ 30924032 (+)
ENSDARG00000102115	ndufc2	15: 11427620 ~ 11443214 (+)
ENSDARG00000069464	cox7a1	15: 20403084 ~ 20405796 (+)
ENSDARG00000030139	sdhdb	15: 21684435 ~ 21692630 (-)
ENSDARG00000101619	micos10	23: 39744369 ~ 39751234 (-)
ENSDARG00000087641	cdh26.2	23: 934927 ~ 969844 (-)
ENSDARG00000031317	ppdpfb	23: 17427838 ~ 17429775 (-)
ENSDARG00000063370	sgk2a	23: 4324625 ~ 4344591 (+)
ENSDARG00000095273	cox8a	21: 28496194 ~ 28500704 (+)
ENSDARG00000073961	si:ch211-160j14.2	21: 32052080 ~ 32060993 (-)
ENSDARG00000023536	nnt	21: 19763546 ~ 19828423 (-)
ENSDARG00000078113	atp5mea	21: 20377752 ~ 20381481 (-)
ENSDARG00000104517	uqcr10	21: 5882300 ~ 5885723 (+)
ENSDARG00000019702	aldocb	21: 39608637 ~ 39639954 (-)
ENSDARG00000021984	ndufa2	21: 44005521 ~ 44009169 (-)
ENSDARG00000115557	cox7b	21: 37442458 ~ 37445458 (+)
ENSDARG00000074552	ndufs7	11: 5842632 ~ 5852715 (+)
ENSDARG00000104470	syngr2b	11: 45159353 ~ 45171208 (-)
ENSDARG00000070083	atp5f1b	11: 13207898 ~ 13213059 (+)
ENSDARG00000061640	sipa1l2	11: 31323746 ~ 31473982 (+)
ENSDARG00000056601	plekha3	11: 29756860 ~ 29768054 (-)
ENSDARG00000070541	si:dkeyp-97e7.9	11: 25388747 ~ 25397129 (+)
ENSDARG00000042777	ndufa11	11: 6411169 ~ 6429705 (-)
ENSDARG00000100116	mrps24	10: 45053577 ~ 45058886 (-)
ENSDARG00000058041	ndufa8	10: 9410304 ~ 9419994 (+)
ENSDARG00000079815	lyrm7	10: 4964463 ~ 4969208 (+)
ENSDARG00000045888	acat1	10: 38663917 ~ 38698966 (+)
ENSDARG00000043371	mdh2	10: 33382858 ~ 33394568 (+)
ENSDARG00000019332	ndufb4	24: 23971056 ~ 23977285 (-)
ENSDARG00000042613	crp3	24: 38092608 ~ 38097305 (-)
ENSDARG00000008407	tspan7b	22: 11440705 ~ 11493236 (-)
ENSDARG00000019404	atp5f1d	22: 18766061 ~ 18779232 (-)
ENSDARG00000076001	pip5k1ca	22: 17543607 ~ 17586112 (-)
ENSDARG00000068478	gpx4a	22: 17589608 ~ 17611742 (-)
ENSDARG00000075768	sdhb	22: 11395 ~ 18224 (+)
ENSDARG00000025566	slc25a3b	25: 3306620 ~ 3321365 (+)
ENSDARG00000075891	sall1b	25: 35986345 ~ 35996141 (-)
ENSDARG00000071076	ldhbb	25: 3326885 ~ 3336587 (+)
ENSDARG00000039880	arpp19b	25: 7653902 ~ 7663608 (-)
ENSDARG00000088383	cox5aa	25: 29075145 ~ 29080125 (-)
ENSDARG00000023583	coq9	25: 14381405 ~ 14398281 (-)
ENSDARG00000070723	ndufa9a	25: 16772392 ~ 16782394 (-)
ENSDARG00000063895	mt-nd1	MT: 3803 ~ 4777 (+)
ENSDARG00000063899	mt-nd2	MT: 4993 ~ 6039 (+)
ENSDARG00000063905	mt-co1	MT: 6425 ~ 7975 (+)
ENSDARG00000063908	mt-co2	MT: 8130 ~ 8820 (+)
ENSDARG00000063911	mt-atp6	MT: 9052 ~ 9735 (+)
ENSDARG00000063912	mt-co3	MT: 9735 ~ 10520 (+)
ENSDARG00000063917	mt-nd4	MT: 11299 ~ 12679 (+)
ENSDARG00000063924	mt-cyb	MT: 15308 ~ 16448 (+)
ENSDARG00000098584	CABZ01102240.1	KN149883.1: 2235 ~ 5187 (-)
--	myo1d	--
--	si:ch211-39k3.2	--
--	si:ch211-68a17.7	--
--	cox5b	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of KS ionocytes.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE168695 (5dpf)	Danio rerio	embryo	15	KS ionocytes	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	ENSDARG00000086248 (kcnj1a.3)	marker	DOI:10.1016/j.devcel.2021.03.027
GSE168695 (5dpf)	Danio rerio	embryo	15	KS ionocytes	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	ENSDARG00000089060 (kcnj1a.5)	marker	DOI:10.1016/j.devcel.2021.03.027
GSE168695 (5dpf)	Danio rerio	embryo	15	KS ionocytes	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	ENSDARG00000088484 (kcnj1a.6)	marker	DOI:10.1016/j.devcel.2021.03.027

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: KS ionocytes

Distribution of KS ionocytes in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences