GENE ID: ENSDARG00000036427


Symbol Location Gene type Genome version Species
slc3a2a 7: 20524064 ~ 20530447 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000036427 (slc3a2a), yellow represents other genes.
  • Hover over the node can see the symbol/gene ID it represents.
  • The more connections, the bigger symbol size.


  • MARKER



    EXPRESSION


    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Radial glia (cluster: 13)
    marker
    DOI:10.1038/nbt.4103
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Microglia (cluster: 4)
    potential marker
    NA
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Glia (cluster: 12)
    Glia (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Glia (cluster: 8)
    potential marker
    NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Blood,immune cell (cluster: 11)
    potential marker
    NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Epidermal cells (cluster: 9)
    potential marker
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Fibroblasts (cluster: 14)
    potential marker
    NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Immune cells (cluster: 11)
    Pigment cells (cluster: 19)
    potential marker
    potential marker
    NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Pigment cells (cluster: 17)
    Immune cells (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Melanophores (cluster: 7)
    potential marker
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Macrophages (cluster: 7)
    potential marker
    NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Macrophages (cluster: 8)
    potential marker
    NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Macrophages (cluster: 8)
    potential marker
    NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Adaxial cells (cluster: 14)
    potential marker
    NA
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos NaR ionocytes (cluster: 11)
    potential marker
    NA
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Pigment cells (cluster: 7)
    potential marker
    NA
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Pigment cells (cluster: 5)
    potential marker
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Neuroblast (cluster: 10)
    Intesinal epithelial cells (cluster: 17)
    Iridophore (cluster: 18)
    Monocytes (cluster: 26)
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Melanophores (cluster: 21)
    Monocytes (cluster: 24)
    Cranial neural crest (cluster: 27)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Floor plate (cluster: 23)
    Monocytes (cluster: 28)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Neural crest (cluster: 14)
    potential marker
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Pigment cell (neural crest derived) (cluster: 12)
    potential marker
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment RPE (cluster: 14)
    Neutrophils (cluster: 16)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment Pigment cells (cluster: 12)
    potential marker
    NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Glia (cluster: 8)
    potential marker
    NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Macrophages (cluster: 2)
    Coronary endothelial cells (cluster: 5)
    Macrophages (cluster: 6)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Macrophages (cluster: 1)
    potential marker
    NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Macrophages (cluster: 6)
    potential marker
    NA
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 5)
    potential marker
    NA
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas endocrine cells (cluster: 1)
    Pancreas endocrine cells (cluster: 3)
    potential marker
    potential marker
    NA
    NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Microglia (cluster: 11)
    potential marker
    NA
    GSE150498 (DSS treated) intestine disease 6dpf, DSS treated Enterocytes (cluster: 2)
    potential marker
    NA
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Immune cells (cluster: 7)
    potential marker
    NA
    GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC
    GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC Immune cells (cluster: 9)
    potential marker
    NA
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Macrophages (cluster: 15)
    potential marker
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Macrophages (cluster: 11)
    potential marker
    NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas endocrine cells (cluster: 1)
    potential marker
    NA
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Muller glia cells (cluster: 5)
    potential marker
    NA
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment Muller glia cells (cluster: 10)
    Horizontal cells (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment Muller glia cells (cluster: 9)
    potential marker
    NA
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih Microglia (cluster: 12)
    Muller glia cells (cluster: 13)
    potential marker
    potential marker
    NA
    NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Thyrocytes (cluster: 7)
    Immune cells (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Thyrocytes (cluster: 12)
    Immune cells (cluster: 5)
    potential marker
    potential marker
    NA
    NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Satellite glia (cluster: 16)
    Melanophores (cluster: 6)
    potential marker
    potential marker
    NA
    NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Brain ventricular zone cells (cluster: 17)
    Macrophages (cluster: 42)
    potential marker
    potential marker
    NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Macrophages (cluster: 13)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 8)
    potential marker
    NA
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Macrophages (cluster: 7)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 7)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 10)
    potential marker
    NA
    GSE151354 (wild type) cartilage baseline 21dpf, wild type
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    PRJNA734348 (dome, control) embryo baseline 4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled)
    PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured