Fish Single-cell RNA Database

CELL TYPE: Pigment cell (neural crest derived)

Distribution of Pigment cell (neural crest derived) in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000030694	atp6v1e1b	4: 5240126 ~ 5247335 (-)
ENSDARG00000045758	cracr2ab	4: 11135048 ~ 11148941 (+)
ENSDARG00000045543	atp6v1f	4: 20049260 ~ 20063234 (-)
ENSDARG00000069607	zgc:162331	4: 4782721 ~ 4795205 (-)
ENSDARG00000045601	cax1	4: 14981854 ~ 14990926 (+)
ENSDARG00000005897	dera	4: 12755136 ~ 12766418 (-)
ENSDARG00000059053	slc13a4	4: 4803698 ~ 4832149 (+)
ENSDARG00000011961	csrp2	4: 2511629 ~ 2525934 (-)
ENSDARG00000105570	crestin	4: 47257854 ~ 47262290 (+)
ENSDARG00000094428	si:dkey-31f5.8	4: 18952482 ~ 18954001 (-)
ENSDARG00000020143	pah	4: 17391680 ~ 17409533 (-)
ENSDARG00000099129	phlda1	4: 2349335 ~ 2350371 (-)
ENSDARG00000098745	tfec	4: 6032640 ~ 6047236 (+)
ENSDARG00000078619	pnp5a	7: 6652967 ~ 6668424 (+)
ENSDARG00000104256	bco1	7: 65261354 ~ 65290474 (+)
ENSDARG00000044125	txn	7: 24357231 ~ 24364826 (-)
ENSDARG00000036427	slc3a2a	7: 20524064 ~ 20530447 (+)
ENSDARG00000054829	pik3c3	7: 24593209 ~ 24621689 (-)
ENSDARG00000102051	mtbl	7: 29148714 ~ 29149228 (+)
ENSDARG00000069461	rnaseka	7: 26048033 ~ 26049328 (-)
ENSDARG00000008811	cmtm3	7: 44608224 ~ 44621281 (+)
ENSDARG00000020397	snx15	7: 19953756 ~ 19966406 (-)
ENSDARG00000058257	slc39a1	7: 13896769 ~ 13906409 (-)
ENSDARG00000029204	tyrp1a	7: 74084203 ~ 74090168 (-)
ENSDARG00000093957	si:dkey-251i10.2	5: 67463027 ~ 67471375 (-)
ENSDARG00000068262	vamp5	5: 28297250 ~ 28307470 (+)
ENSDARG00000063288	slc2a11b	5: 10014604 ~ 10046183 (+)
ENSDARG00000077653	rabl6b	5: 26805608 ~ 26828380 (+)
ENSDARG00000021366	fbp1a	5: 44833313 ~ 44843738 (-)
ENSDARG00000039626	nrgna	5: 58372164 ~ 58382655 (+)
ENSDARG00000016128	ap3m2	5: 14375108 ~ 14390445 (-)
ENSDARG00000035565	atp6v0a2b	5: 24543862 ~ 24567869 (+)
ENSDARG00000088390	nme4	3: 15068321 ~ 15082475 (-)
ENSDARG00000009313	napsa	3: 25121156 ~ 25133244 (+)
ENSDARG00000019556	clcn7	3: 27664864 ~ 27709312 (+)
ENSDARG00000037935	aldh16a1	3: 32080403 ~ 32098515 (+)
ENSDARG00000077467	sox10	3: 1492174 ~ 1501255 (+)
ENSDARG00000059743	tmem98	3: 39099716 ~ 39110228 (+)
ENSDARG00000054610	coro1a	3: 30926364 ~ 30941362 (-)
ENSDARG00000094695	si:dkey-204f11.64	3: 34140507 ~ 34147100 (+)
ENSDARG00000074842	snx8a	3: 42090418 ~ 42120172 (+)
ENSDARG00000010727	ttyh2l	3: 51563695 ~ 51657722 (+)
ENSDARG00000028048	rdh8a	3: 53687645 ~ 53722182 (-)
ENSDARG00000075015	soul5	3: 53476155 ~ 53486169 (-)
ENSDARG00000101749	zgc:92161	3: 49043917 ~ 49058326 (+)
ENSDARG00000100376	amdhd2	3: 13523773 ~ 13546610 (-)
ENSDARG00000071084	wipf1b	6: 10781146 ~ 10809546 (-)
ENSDARG00000006093	cdk15	6: 9747108 ~ 9792004 (-)
ENSDARG00000070991	mlpha	6: 15604759 ~ 15641686 (-)
ENSDARG00000003732	mitfa	6: 43390387 ~ 43433277 (+)
ENSDARG00000016963	slc16a1a	6: 48978202 ~ 49049019 (+)
ENSDARG00000061303	oca2	6: 37894220 ~ 38054851 (+)
ENSDARG00000043581	gadd45aa	2: 10280645 ~ 10284572 (+)
ENSDARG00000011683	prtfdc1	2: 12255568 ~ 12280508 (+)
ENSDARG00000058734	prdx1	2: 6104378 ~ 6115688 (-)
ENSDARG00000013613	anxa13l	2: 9821757 ~ 9842240 (+)
ENSDARG00000038867	shhb	2: 30050541 ~ 30055432 (-)
ENSDARG00000075706	si:ch211-106h4.9	2: 31599963 ~ 31664615 (-)
ENSDARG00000023713	aqp1a.1	2: 2737422 ~ 2749333 (+)
ENSDARG00000007425	apol1	2: 37971353 ~ 37974725 (+)
ENSDARG00000007480	rpe65a	2: 1428696 ~ 1443692 (-)
ENSDARG00000008457	faah2a	1: 40237276 ~ 40258430 (+)
ENSDARG00000056151	tyrp1b	1: 19332837 ~ 19346048 (+)
ENSDARG00000016706	atic	1: 5437390 ~ 5504130 (+)
ENSDARG00000061985	rbm47	1: 19353048 ~ 19402815 (-)
ENSDARG00000008413	atp11a	1: 46263473 ~ 46401385 (-)
ENSDARG00000099729	pcdh10a	1: 12763461 ~ 12797410 (+)
ENSDARG00000031952	mb	1: 55137943 ~ 55145085 (+)
ENSDARG00000092240	si:ch211-243a20.3	1: 45351890 ~ 45366422 (+)
ENSDARG00000053269	slc2a15b	1: 31573225 ~ 31598417 (+)
ENSDARG00000037278	lrata	1: 25696798 ~ 25698039 (+)
ENSDARG00000102176	pla1a	9: 21214940 ~ 21226132 (+)
ENSDARG00000005823	slc39a10	9: 24920677 ~ 24951662 (+)
ENSDARG00000005049	rab20	9: 8887528 ~ 8895243 (-)
ENSDARG00000042707	cx30.3	9: 21401189 ~ 21405066 (+)
ENSDARG00000006008	dct	9: 53327332 ~ 53352682 (+)
ENSDARG00000012796	hnmt	9: 10138196 ~ 10145880 (-)
ENSDARG00000034572	gpr143	9: 55056310 ~ 55090829 (+)
ENSDARG00000040039	pttg1ipb	9: 12655278 ~ 12659140 (-)
ENSDARG00000025375	idh1	9: 28103735 ~ 28129476 (+)
ENSDARG00000032496	pon1	16: 24646600 ~ 24656265 (-)
ENSDARG00000010032	cmtm7	16: 41495670 ~ 41503925 (-)
ENSDARG00000044605	stx12l	16: 7626535 ~ 7641367 (+)
ENSDARG00000075718	rpz5	16: 46492756 ~ 46496293 (+)
ENSDARG00000002311	fabp11b	16: 16148761 ~ 16152199 (-)
ENSDARG00000055115	dtnbp1a	16: 25504109 ~ 25535430 (-)
ENSDARG00000004517	ppat	20: 25625872 ~ 25639508 (+)
ENSDARG00000033539	paics	20: 25618114 ~ 25631256 (-)
ENSDARG00000019253	rhag	20: 14014813 ~ 14054083 (-)
ENSDARG00000003750	pfas	20: 25445826 ~ 25473275 (+)
ENSDARG00000029036	rab32a	20: 32009271 ~ 32045182 (-)
ENSDARG00000013628	cd164	20: 32118559 ~ 32139062 (+)
ENSDARG00000011175	atp6v1d	20: 51088606 ~ 51100669 (-)
ENSDARG00000055365	si:dkey-25e12.3	20: 26543683 ~ 26551233 (-)
ENSDARG00000042854	ephx1	20: 36628059 ~ 36638179 (+)
ENSDARG00000043511	prdx6	20: 15164482 ~ 15184869 (+)
ENSDARG00000028275	sult1st1	8: 46499098 ~ 46509194 (-)
ENSDARG00000102612	slc15a4	8: 35809081 ~ 35960987 (-)
ENSDARG00000043701	gpd1a	8: 7033049 ~ 7052493 (+)
ENSDARG00000052379	ccdc22	8: 23615132 ~ 23638031 (+)
ENSDARG00000024540	tspan36	8: 29726620 ~ 29734951 (+)
ENSDARG00000007275	si:ch211-251b21.1	8: 47633438 ~ 47665026 (+)
ENSDARG00000014106	cfl2	17: 10007071 ~ 10025234 (-)
ENSDARG00000055240	xdh	17: 33340675 ~ 33374538 (+)
ENSDARG00000070453	gch1	17: 15121977 ~ 15149275 (-)
ENSDARG00000034222	hs1bp3	17: 48947762 ~ 48961698 (+)
ENSDARG00000091813	si:dkey-21a6.5	17: 43519290 ~ 43533095 (-)
ENSDARG00000038969	zgc:113142	17: 51627209 ~ 51638206 (+)
ENSDARG00000097964	arhgef33	17: 24668528 ~ 24680965 (-)
ENSDARG00000040492	mthfd1b	17: 49354343 ~ 49412313 (-)
ENSDARG00000089076	gphna	17: 33999630 ~ 34185513 (+)
ENSDARG00000004270	atl3	14: 30773764 ~ 30794824 (+)
ENSDARG00000028740	msnb	14: 9287683 ~ 9336601 (+)
ENSDARG00000101794	atp6v0e1	14: 52565660 ~ 52576034 (+)
ENSDARG00000088168	ablim3	14: 34634145 ~ 34771864 (-)
ENSDARG00000025912	bscl2l	14: 6159162 ~ 6175947 (+)
ENSDARG00000040190	qdpra	14: 46873229 ~ 46897067 (-)
ENSDARG00000037097	slc7a2	14: 30367602 ~ 30390145 (-)
ENSDARG00000104068	gstp1	14: 3507326 ~ 3514055 (+)
ENSDARG00000026170	hps1	13: 40686133 ~ 40716702 (+)
ENSDARG00000029894	slc2a15a	13: 28417297 ~ 28442086 (+)
ENSDARG00000069332	tmem72	13: 30704361 ~ 30713236 (-)
ENSDARG00000039605	mat1a	13: 18628920 ~ 18637244 (-)
ENSDARG00000039422	fuom	13: 24584401 ~ 24586483 (+)
ENSDARG00000031981	pcbd1	13: 25720969 ~ 25726534 (+)
ENSDARG00000054890	rgra	13: 29446226 ~ 29455859 (-)
ENSDARG00000086114	CR792417.1	13: 42552495 ~ 42560662 (-)
ENSDARG00000042214	tmem243a	18: 8912113 ~ 8916000 (+)
ENSDARG00000088709	tnfaip8l3	18: 39522468 ~ 39583601 (-)
ENSDARG00000041691	bhlhe41	18: 16125852 ~ 16130165 (+)
ENSDARG00000057698	ctsd	18: 16133595 ~ 16146081 (+)
ENSDARG00000058003	wfdc1	18: 14595546 ~ 14617707 (+)
ENSDARG00000052497	zgc:110789	18: 12034985 ~ 12052132 (-)
ENSDARG00000062558	rspry1	18: 17725410 ~ 17751843 (+)
ENSDARG00000069630	tat	18: 13162728 ~ 13179510 (+)
ENSDARG00000068876	zgc:153031	18: 15132112 ~ 15141119 (+)
ENSDARG00000060457	pmp22b	12: 37275336 ~ 37299671 (-)
ENSDARG00000045153	slc16a8	12: 19191787 ~ 19198771 (+)
ENSDARG00000099101	gch2	12: 25085751 ~ 25092570 (+)
ENSDARG00000045269	pts	12: 312448 ~ 314899 (-)
ENSDARG00000103789	tmem130	12: 17865374 ~ 17875270 (+)
ENSDARG00000007597	bloc1s4	19: 25679538 ~ 25693728 (-)
ENSDARG00000030449	crabp2b	19: 8973042 ~ 8980038 (+)
ENSDARG00000035880	atp6v1c1b	19: 32947910 ~ 32966762 (+)
ENSDARG00000008861	tfap2e	19: 47429722 ~ 47456787 (-)
ENSDARG00000087611	FP085398.1	19: 26828502 ~ 26844582 (+)
ENSDARG00000044781	bace2	15: 6459847 ~ 6493615 (+)
ENSDARG00000069823	proca1	15: 15445113 ~ 15449929 (-)
ENSDARG00000099563	inpp5ka	15: 33843596 ~ 33865029 (+)
ENSDARG00000068828	bloc1s3	15: 35036368 ~ 35101292 (-)
ENSDARG00000039077	tyr	15: 43799258 ~ 43818697 (+)
ENSDARG00000105073	CU655961.2	15: 44133972 ~ 44143503 (+)
ENSDARG00000007751	lmnl3	23: 45845159 ~ 45860097 (+)
ENSDARG00000020764	slmapb	23: 19590006 ~ 19604413 (+)
ENSDARG00000037153	atp6ap1b	23: 26079467 ~ 26094178 (+)
ENSDARG00000015003	arhgap4b	23: 18615992 ~ 18668836 (-)
ENSDARG00000033760	pmelb	23: 35672542 ~ 35690336 (+)
ENSDARG00000070818	pax7b	23: 20863145 ~ 20936845 (+)
ENSDARG00000004301	rhogb	21: 30937690 ~ 30951909 (+)
ENSDARG00000075191	oacyl	21: 10828828 ~ 10846928 (+)
ENSDARG00000029905	phyhd1	21: 4508959 ~ 4525080 (+)
ENSDARG00000010977	rab34b	21: 26062452 ~ 26071773 (-)
ENSDARG00000002593	slc45a2	21: 19445942 ~ 19484289 (+)
ENSDARG00000028257	cyb561a3b	21: 16102938 ~ 16114061 (-)
ENSDARG00000074719	rab38c	21: 30549512 ~ 30560490 (+)
ENSDARG00000044684	rbp4l	21: 20338613 ~ 20342096 (-)
ENSDARG00000019713	oatx	21: 44091342 ~ 44104600 (-)
ENSDARG00000104470	syngr2b	11: 45159353 ~ 45171208 (-)
ENSDARG00000057575	pnp4a	11: 24251141 ~ 24299538 (+)
ENSDARG00000103735	elovl1b	11: 13094179 ~ 13152524 (-)
ENSDARG00000077082	agtrap	11: 16040517 ~ 16064291 (+)
ENSDARG00000056638	pir	11: 29917613 ~ 29936755 (-)
ENSDARG00000070161	vamp3	11: 39928828 ~ 39956925 (+)
ENSDARG00000098699	si:ch211-11c3.9	11: 36665359 ~ 36674376 (+)
ENSDARG00000091298	pmela	11: 3254252 ~ 3272020 (+)
ENSDARG00000056028	slc22a7a	11: 30729745 ~ 30742966 (+)
ENSDARG00000091637	pip4k2cb	11: 2398843 ~ 2413107 (+)
ENSDARG00000101557	scarb1	10: 44699734 ~ 44748270 (+)
ENSDARG00000053381	plpp1a	10: 8265972 ~ 8295342 (-)
ENSDARG00000074316	itga1	10: 8730988 ~ 8841038 (+)
ENSDARG00000056915	si:ch211-237l4.6	10: 22782522 ~ 22786450 (+)
ENSDARG00000077202	mocs2	10: 8947228 ~ 8957480 (-)
ENSDARG00000044295	pip5k1ba	10: 15881309 ~ 15919839 (-)
ENSDARG00000026322	dhrs13a.1	10: 36795861 ~ 36808348 (-)
ENSDARG00000059391	gyg1b	24: 3307857 ~ 3326369 (+)
ENSDARG00000058394	tagln3b	24: 21917012 ~ 21934571 (-)
ENSDARG00000089205	si:dkey-73n8.3	24: 18469766 ~ 18485491 (-)
ENSDARG00000076318	atp6v1ab	24: 21154120 ~ 21172122 (-)
ENSDARG00000098761	rgs2	22: 24246213 ~ 24248420 (-)
ENSDARG00000008306	rdh5	22: 10110358 ~ 10121880 (-)
ENSDARG00000029057	tm6sf2	22: 17784414 ~ 17823608 (+)
ENSDARG00000043180	gpd1b	22: 6996046 ~ 7006974 (-)
ENSDARG00000063195	pxk	22: 10166407 ~ 10199014 (+)
ENSDARG00000024276	pcbp4	22: 32289567 ~ 32507966 (-)
ENSDARG00000071475	aox5	22: 14083729 ~ 14115316 (-)
ENSDARG00000046030	zgc:110339	25: 10547228 ~ 10553685 (+)
ENSDARG00000051874	stra6	25: 22571475 ~ 22634675 (+)
ENSDARG00000103271	pla2g15	25: 13689060 ~ 13703826 (-)
ENSDARG00000038288	cd151	25: 3809733 ~ 3830272 (-)
ENSDARG00000007711	rab3il1	25: 3099073 ~ 3118114 (+)
ENSDARG00000071062	hps5	25: 3148431 ~ 3192405 (-)
ENSDARG00000045808	rlbp1b	25: 19105804 ~ 19118127 (+)
ENSDARG00000062059	si:ch211-236l14.4	25: 23656879 ~ 23745765 (-)
ENSDARG00000103476	trpm1b	25: 34576067 ~ 34615463 (+)
ENSDARG00000099154	CABZ01032488.1	KN149764.1: 4168 ~ 17479 (-)
--	agrp2	--
--	akr1b1	--
--	c13h10orf11	--
--	cndp1	--
--	fam212ab	--
--	fam213ab	--
--	fgfbp1b.1	--
--	gramd2	--
--	hp.1	--
--	plin3	--
--	rbp1	--
--	si:dkey-226k3.4	--
--	si:dkey-48n15.2	--
--	si:dkey-54h16.1	--
--	tmem19	--
--	urah	--
--	wu:fc46h12	--
--	zgc:162150	--
--	adssl1	--
--	irbp	--
--	cabz01102076.1	--
--	cr855387.1	--
--	mreg	--
--	si:dkey-166f24.2	--
--	slc4a5	--
--	zgc:194355	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Pigment cell (neural crest derived).

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE158142 (24hpf)	Danio rerio	head	12	Pigment cell (neural crest derived)	baseline	24hpf, untreatment	ENSDARG00000057575 (pnp4a)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	12	Pigment cell (neural crest derived)	baseline	24hpf, untreatment	ENSDARG00000042214 (tmem243a)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	12	Pigment cell (neural crest derived)	baseline	24hpf, untreatment	ENSDARG00000020143 (pah)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	12	Pigment cell (neural crest derived)	baseline	24hpf, untreatment	ENSDARG00000071475 (aox5)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	12	Pigment cell (neural crest derived)	baseline	24hpf, untreatment	ENSDARG00000053269 (slc2a15b)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	12	Pigment cell (neural crest derived)	baseline	24hpf, untreatment	ENSDARG00000003732 (mitfa)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	12	Pigment cell (neural crest derived)	baseline	24hpf, untreatment	ENSDARG00000045601 (cax1)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (24hpf)	Danio rerio	head	12	Pigment cell (neural crest derived)	baseline	24hpf, untreatment	ENSDARG00000077082 (agtrap)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (1.5dpf)	Danio rerio	head	13	Pigment cell (neural crest derived)	baseline	1.5dpf, untreatment	-- (urah)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (1.5dpf)	Danio rerio	head	13	Pigment cell (neural crest derived)	baseline	1.5dpf, untreatment	ENSDARG00000044684 (rbp4l)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (1.5dpf)	Danio rerio	head	13	Pigment cell (neural crest derived)	baseline	1.5dpf, untreatment	ENSDARG00000056028 (slc22a7a)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (1.5dpf)	Danio rerio	head	13	Pigment cell (neural crest derived)	baseline	1.5dpf, untreatment	ENSDARG00000103789 (tmem130)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (1.5dpf)	Danio rerio	head	13	Pigment cell (neural crest derived)	baseline	1.5dpf, untreatment	ENSDARG00000075191 (oacyl)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (3dpf)	Danio rerio	head	7	Pigment cell (neural crest derived)	baseline	3dpf, untreatment	ENSDARG00000056028 (slc22a7a)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (3dpf)	Danio rerio	head	7	Pigment cell (neural crest derived)	baseline	3dpf, untreatment	ENSDARG00000103789 (tmem130)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (3dpf)	Danio rerio	head	7	Pigment cell (neural crest derived)	baseline	3dpf, untreatment	ENSDARG00000025912 (bscl2l)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (3dpf)	Danio rerio	head	7	Pigment cell (neural crest derived)	baseline	3dpf, untreatment	ENSDARG00000071475 (aox5)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (3dpf)	Danio rerio	head	7	Pigment cell (neural crest derived)	baseline	3dpf, untreatment	ENSDARG00000099101 (gch2)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (3dpf)	Danio rerio	head	7	Pigment cell (neural crest derived)	baseline	3dpf, untreatment	ENSDARG00000045601 (cax1)	marker	DOI:10.1016/j.neuron.2020.09.023

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Pigment cell (neural crest derived)

Distribution of Pigment cell (neural crest derived) in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

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