Fish Single-cell RNA Database

GENE ID: ENSDARG00000092240

Symbol	Location	Gene type	Genome version	Species
si:ch211-243a20.3	1: 45351890 ~ 45366422 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000092240 (si:ch211-243a20.3), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000088332	alx4a	7: 26893688 ~ 26924903 (-)
ENSDARG00000044767	tspan10	3: 15176737 ~ 15186292 (+)
ENSDARG00000076959	si:ch211-38m6.6	2: 7847480 ~ 7874384 (+)
ENSDARG00000016835	tcirg1a	1: 44870880 ~ 44901163 (-)
ENSDARG00000093053	vap	1: 9113630 ~ 9115034 (-)
ENSDARG00000092240	si:ch211-243a20.3	1: 45351890 ~ 45366422 (+)
ENSDARG00000070110	opn5	20: 35998073 ~ 36036696 (+)
ENSDARG00000038969	zgc:113142	17: 51627209 ~ 51638206 (+)
ENSDARG00000025912	bscl2l	14: 6159162 ~ 6175947 (+)
ENSDARG00000029894	slc2a15a	13: 28417297 ~ 28442086 (+)
ENSDARG00000011076	zgc:91968	19: 4990320 ~ 4999232 (+)
ENSDARG00000063621	aadac	15: 1045374 ~ 1066269 (-)
ENSDARG00000075436	sytl2b	15: 19697246 ~ 19724932 (-)
ENSDARG00000109783	igsf11	15: 46386261 ~ 46598864 (+)
ENSDARG00000069495	tmem179b	21: 25664393 ~ 25669820 (-)
ENSDARG00000056028	slc22a7a	11: 30729745 ~ 30742966 (+)
ENSDARG00000036117	mchr2	24: 34806822 ~ 34823043 (+)
ENSDARG00000089205	si:dkey-73n8.3	24: 18469766 ~ 18485491 (-)
ENSDARG00000074528	unm_sa821	24: 6657312 ~ 6671549 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
	GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	Osteoblast (cluster: 3) Chondrocytes (cluster: 6)	potential marker potential marker	NA NA
	GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+	Chondrocytes (cluster: 5)	potential marker	NA
	PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells	Pigment cells (cluster: 7)	potential marker	NA
	PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells	Pigment cells (cluster: 10)	potential marker	NA
	PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	Iridophore (cluster: 18)	potential marker	NA
	PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development	Melanophores (cluster: 21)	potential marker	NA
	GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	Neutrophils (cluster: 8)	potential marker	NA
	GSE158142 (24hpf)	head	baseline	24hpf, untreatment	Pigment cell (neural crest derived) (cluster: 12)	potential marker	NA