Fish Single-cell RNA Database

GENE ID: ENSDARG00000044767

Symbol	Location	Gene type	Genome version	Species
tspan10	3: 15176737 ~ 15186292 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000044767 (tspan10), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000055185	tm4sf5	7: 21841037 ~ 21848205 (+)
ENSDARG00000036080	cd81a	7: 32983440 ~ 33023404 (-)
ENSDARG00000063288	slc2a11b	5: 10014604 ~ 10046183 (+)
ENSDARG00000009568	ca10b	3: 34919810 ~ 34981673 (+)
ENSDARG00000044767	tspan10	3: 15176737 ~ 15186292 (+)
ENSDARG00000002508	ankrd33ab	6: 39279104 ~ 39286029 (+)
ENSDARG00000059972	raly	6: 50021410 ~ 50204262 (-)
ENSDARG00000060354	samd7	2: 37227011 ~ 37242537 (+)
ENSDARG00000093458	si:dkey-76d14.2	2: 45068366 ~ 45070442 (+)
ENSDARG00000075098	wdr17	1: 38758261 ~ 38803495 (+)
ENSDARG00000075505	si:ch211-132g1.7	1: 1941031 ~ 2000357 (+)
ENSDARG00000092240	si:ch211-243a20.3	1: 45351890 ~ 45366422 (+)
ENSDARG00000078172	CU984600.1	9: 492459 ~ 532470 (+)
ENSDARG00000091135	si:ch211-253p18.5	20: 20713385 ~ 20722619 (+)
ENSDARG00000079029	dhx32b	17: 32343121 ~ 32360489 (+)
ENSDARG00000019179	lrit1a	13: 29462249 ~ 29467558 (+)
ENSDARG00000030626	lrit2	13: 29470442 ~ 29474304 (+)
ENSDARG00000005842	cd9a	18: 7122577 ~ 7143920 (-)
ENSDARG00000022437	cd81b	18: 27318589 ~ 27336157 (+)
ENSDARG00000097080	si:ch73-181m17.1	12: 38983989 ~ 39031459 (+)
ENSDARG00000052644	ca10a	12: 21298317 ~ 21553637 (+)
ENSDARG00000090630	si:dkey-32n7.8	12: 4196493 ~ 4199728 (-)
ENSDARG00000062695	ccdc126	19: 20163826 ~ 20177002 (+)
ENSDARG00000055638	ankrd33aa	23: 27862807 ~ 27875140 (-)
ENSDARG00000012125	cnga1b	23: 43849190 ~ 43866354 (+)
ENSDARG00000002593	slc45a2	21: 19445942 ~ 19484289 (+)
ENSDARG00000091298	pmela	11: 3254252 ~ 3272020 (+)
ENSDARG00000112889	rab38b	10: 25272355 ~ 25283609 (+)
ENSDARG00000086362	pou6f2	24: 10039165 ~ 10272212 (+)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry	Melanophores (cluster: 7)	potential marker	NA
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells	Pigment cells (cluster: 7)	potential marker	NA
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells	Pigment cells (cluster: 5)	potential marker	NA
PRJNA706197 (24hpf)	embryo	baseline	24hpf, FACS sorted sox10:nEOS cells	Neural crest (cluster: 3)	potential marker	NA
GSE122680 (24hpf)	retina	baseline	24hpf, WT, untreatment	Muller glia cells (cluster: 5)	potential marker	NA
GSE122680 (1.5dpf)	retina	baseline	1.5dpf, WT, untreatment	Muller glia cells (cluster: 10)	potential marker	NA
GSE122680 (3dpf)	retina	baseline	3dpf, WT, untreatment
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	Melanophores (cluster: 6)	potential marker	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	Xanthophores (cluster: 33) Melanophores (cluster: 45)	potential marker potential marker	NA NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE144944 (fgfr3 +\|+)	cranial vault	baseline	1mpf, fgfr3 +/+
GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-
GSE126647 (control)	embryo	baseline	1.17dpf, control nkx2.5:ZsYellow+ cells
GSE126647 (Pbx4-depleted)	embryo	growth	1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
PRJNA656271 (1.5dpf)	embryo	baseline	1.5dpf, FACS-isolated EGFP+ cells
PRJNA706197 (20hpf)	embryo	baseline	20hpf, FACS sorted sox10:nEOS cells
PRJNA706197 (18hpf)	embryo	baseline	18hpf, FACS sorted sox10:nEOS cells
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg
GSE122680 (2dpf)	retina	baseline	2dpf, WT, untreatment
PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih
PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment
GSE163907 (24hpf)	trunk	baseline	24hpf, trunk tg(sox10:GFP) positive cells
PRJNA641144 (P_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo primary tumors
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000044767

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences