GENE ID: ENSDARG00000103476


Symbol Location Gene type Genome version Species
trpm1b 25: 34576067 ~ 34615463 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000103476 (trpm1b), yellow represents other genes.
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  • MARKER



    EXPRESSION


    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Pigment cells (cluster: 19)
    potential marker
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Pigment cells (cluster: 17)
    potential marker
    NA
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Pigment cells (cluster: 10)
    potential marker
    NA
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells Neural crest (cluster: 3)
    potential marker
    NA
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells Neural crest (cluster: 3)
    potential marker
    NA
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Neural crest (cluster: 4)
    potential marker
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Iridophore (cluster: 18)
    Epiphysis (cluster: 29)
    potential marker
    potential marker
    NA
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Melanophores (cluster: 21)
    Xanthophores (cluster: 25)
    potential marker
    potential marker
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Neutrophils (cluster: 8)
    potential marker
    NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Neural crest (cluster: 14)
    potential marker
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Pigment cell (neural crest derived) (cluster: 12)
    potential marker
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment RPE (cluster: 14)
    potential marker
    NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment Pigment cells (cluster: 12)
    potential marker
    NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Pigment cell (neural crest derived) (cluster: 7)
    potential marker
    NA
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Muller glia cells (cluster: 5)
    potential marker
    NA
    GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment Muller glia cells (cluster: 10)
    potential marker
    NA
    GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment
    PRJNA672101 (nrl-KO) retina growth 5mpf, three retinas from nrl-KO zebrafsih
    PRJNA672101 (WT) retina baseline 5mpf, three retinas from WT zebrafsih
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Xanthophores (cluster: 5)
    Melanophores (cluster: 6)
    Pigment progenitors (cluster: 7)
    Iridophore (cluster: 9)
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells Tumor (cluster: 1)
    potential marker
    NA
    PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture Melanoma cells (cluster: 1)
    potential marker
    NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Xanthophores (cluster: 33)
    Melanophores (cluster: 45)
    potential marker
    potential marker
    NA
    NA
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
    PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
    PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours
    GSE148591 (3mpf) pituitary transplant 3mpf, graft transplantation during early embryogenesis
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR)
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR)
    GSE163907 (24hpf) trunk baseline 24hpf, trunk tg(sox10:GFP) positive cells
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment
    PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture
    PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors
    PRJNA641144 (D_PRO) tumor disease adult, ZMEL1-PRO cells in vitro individual culture
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases
    PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors
    PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/-
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT

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