Fish Single-cell RNA Database

CELL TYPE: Tumor

Distribution of Tumor in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000011961	csrp2	4: 2511629 ~ 2525934 (-)
ENSDARG00000090401	CABZ01020840.1	4: 4601815 ~ 4612116 (-)
ENSDARG00000102750	cdh1	7: 53059299 ~ 53117237 (-)
ENSDARG00000104227	nop10	7: 1505507 ~ 1508912 (+)
ENSDARG00000029500	rpl34	7: 59649399 ~ 59664545 (+)
ENSDARG00000014690	rps4x	7: 51633815 ~ 51639699 (-)
ENSDARG00000099380	rpl13	7: 67467702 ~ 67477495 (+)
ENSDARG00000019230	rpl7a	5: 33284144 ~ 33287691 (-)
ENSDARG00000051783	rplp0	5: 1950660 ~ 1963498 (-)
ENSDARG00000023950	znhit3	5: 3927989 ~ 3937715 (+)
ENSDARG00000039887	c1qbp	5: 3914403 ~ 3927763 (-)
ENSDARG00000058105	rpl36a	5: 22510639 ~ 22515186 (+)
ENSDARG00000035400	btf3	5: 34987448 ~ 34997630 (-)
ENSDARG00000018902	pes	5: 12836913 ~ 12865386 (+)
ENSDARG00000038312	rcl1	5: 1833741 ~ 1869982 (-)
ENSDARG00000035133	pho	5: 62319217 ~ 62335694 (+)
ENSDARG00000078214	mybbp1a	5: 8712798 ~ 8765428 (-)
ENSDARG00000112476	surf2	5: 1203767 ~ 1218801 (-)
ENSDARG00000103846	hspa5	5: 2713779 ~ 2721686 (-)
ENSDARG00000038768	mrpl12	3: 50054187 ~ 50066528 (-)
ENSDARG00000022232	ppan	3: 54553931 ~ 54567961 (+)
ENSDARG00000020232	eif6	6: 52339548 ~ 52348651 (-)
ENSDARG00000059906	sdc4	6: 52663097 ~ 52675630 (-)
ENSDARG00000074242	serbp1a	6: 34931597 ~ 34938746 (-)
ENSDARG00000074979	larp4ab	6: 39633065 ~ 39653972 (-)
ENSDARG00000034897	rps10	6: 54174696 ~ 54180699 (-)
ENSDARG00000044562	cycsb	6: 10910589 ~ 10912424 (-)
ENSDARG00000104353	nop58	6: 9664206 ~ 9695294 (-)
ENSDARG00000015862	rpl5b	6: 29086594 ~ 29097393 (+)
ENSDARG00000091831	ddx27	6: 57436314 ~ 57476465 (-)
ENSDARG00000070991	mlpha	6: 15604759 ~ 15641686 (-)
ENSDARG00000003732	mitfa	6: 43390387 ~ 43433277 (+)
ENSDARG00000030408	rps26l	6: 49520124 ~ 49526510 (-)
ENSDARG00000041435	uba52	2: 56339058 ~ 56348727 (-)
ENSDARG00000007241	mycb	2: 32016256 ~ 32018371 (+)
ENSDARG00000013576	gadd45bb	2: 36939749 ~ 36941988 (+)
ENSDARG00000055996	rps8a	2: 26498446 ~ 26501868 (+)
ENSDARG00000054980	ebna1bp2	2: 13694450 ~ 13721149 (+)
ENSDARG00000007320	rpl7	2: 30177476 ~ 30182353 (-)
ENSDARG00000018961	gtpbp4	2: 42361373 ~ 42375275 (-)
ENSDARG00000099104	rpl24	1: 6408 ~ 12027 (-)
ENSDARG00000035692	rps3a	1: 24355515 ~ 24359653 (+)
ENSDARG00000037350	rpl9	1: 23269503 ~ 23274504 (-)
ENSDARG00000040666	nifk	9: 38158570 ~ 38162095 (+)
ENSDARG00000030789	ddx18	9: 38314466 ~ 38352220 (+)
ENSDARG00000075282	irs2b	9: 8429239 ~ 8454060 (-)
ENSDARG00000091411	si:ch211-214p13.9	9: 9411009 ~ 9419704 (-)
ENSDARG00000056167	hspe1	9: 32301017 ~ 32305007 (+)
ENSDARG00000056160	hspd1	9: 32286605 ~ 32300783 (-)
ENSDARG00000034572	gpr143	9: 55056310 ~ 55090829 (+)
ENSDARG00000040039	pttg1ipb	9: 12655278 ~ 12659140 (-)
ENSDARG00000053365	rpl31	9: 56225410 ~ 56232296 (-)
ENSDARG00000009978	icn	16: 23431189 ~ 23432552 (+)
ENSDARG00000053912	fbl	16: 42177659 ~ 42186093 (-)
ENSDARG00000030602	rps19	16: 24188114 ~ 24195361 (-)
ENSDARG00000005791	rpl28	16: 51883725 ~ 51889734 (-)
ENSDARG00000006837	mycn	20: 33294428 ~ 33299384 (+)
ENSDARG00000003584	pla2g7	20: 35461736 ~ 35471079 (-)
ENSDARG00000030053	eef1db	20: 52546186 ~ 52582645 (+)
ENSDARG00000042864	rpl7l1	20: 36675083 ~ 36679233 (-)
ENSDARG00000099022	faua	20: 54201459 ~ 54208344 (-)
ENSDARG00000068787	slc6a17	8: 24854600 ~ 24890992 (+)
ENSDARG00000061314	ngrn	8: 25034529 ~ 25040762 (+)
ENSDARG00000024540	tspan36	8: 29726620 ~ 29734951 (+)
ENSDARG00000060796	slc20a2	8: 29770098 ~ 29851706 (-)
ENSDARG00000003527	mak16	8: 45394914 ~ 45416187 (-)
ENSDARG00000042905	rpl10a	8: 23738122 ~ 23742985 (+)
ENSDARG00000044093	rpl13a	17: 24615091 ~ 24618279 (+)
ENSDARG00000030064	plekha1a	17: 21887823 ~ 21913328 (+)
ENSDARG00000077264	wdr43	17: 24821627 ~ 24835683 (+)
ENSDARG00000037570	polr1d	14: 9077314 ~ 9085349 (-)
ENSDARG00000003035	hspa9	14: 12142813 ~ 12168897 (+)
ENSDARG00000102317	rpl26	14: 52563794 ~ 52568371 (+)
ENSDARG00000036316	rpl39	14: 33331773 ~ 33348221 (-)
ENSDARG00000004078	acsl4a	14: 28438947 ~ 28459446 (+)
ENSDARG00000017741	g3bp1	14: 25923373 ~ 25935167 (-)
ENSDARG00000075014	sqstm1	14: 16765992 ~ 16771405 (+)
ENSDARG00000100366	si:dkey-102m7.3	14: 14836468 ~ 14838541 (+)
ENSDARG00000090337	pprc1	13: 12007904 ~ 12021566 (-)
ENSDARG00000039347	rps24	13: 30225262 ~ 30235220 (+)
ENSDARG00000012274	eif4e1c	13: 18311410 ~ 18324469 (+)
ENSDARG00000039034	marcksl1a	13: 46177478 ~ 46180510 (+)
ENSDARG00000099439	serp1	18: 3572314 ~ 3576434 (+)
ENSDARG00000042214	tmem243a	18: 8912113 ~ 8916000 (+)
ENSDARG00000041623	mt2	18: 17534627 ~ 17535979 (+)
ENSDARG00000025332	rbm28	18: 10692945 ~ 10713414 (-)
ENSDARG00000057167	eif4g2b	18: 16715864 ~ 16726206 (+)
ENSDARG00000002720	utp15	18: 7037349 ~ 7056760 (-)
ENSDARG00000016080	nob1	18: 5861755 ~ 5875433 (-)
ENSDARG00000059075	nip7	18: 5843583 ~ 5850683 (-)
ENSDARG00000023299	snu13b	12: 10443785 ~ 10447178 (+)
ENSDARG00000023290	fabp3	19: 42955280 ~ 42993306 (+)
ENSDARG00000021864	rplp1	19: 1852078 ~ 1855368 (-)
ENSDARG00000011648	snrpd1	19: 1872794 ~ 1877746 (+)
ENSDARG00000023298	rps27.1	19: 8743260 ~ 8748571 (-)
ENSDARG00000030449	crabp2b	19: 8973042 ~ 8980038 (+)
ENSDARG00000062590	pleca	19: 22407819 ~ 22621991 (-)
ENSDARG00000100392	rps18	19: 18617608 ~ 18627025 (-)
ENSDARG00000035871	rpl30	19: 32855139 ~ 32860780 (+)
ENSDARG00000012044	polr3gla	19: 24545731 ~ 24555949 (-)
ENSDARG00000016623	si:ch211-195b13.1	19: 24872159 ~ 24889227 (+)
ENSDARG00000103433	rpl14	19: 48364312 ~ 48371092 (-)
ENSDARG00000035868	spire1a	19: 32979132 ~ 33072157 (+)
ENSDARG00000009285	rpl15	19: 17385561 ~ 17395587 (+)
ENSDARG00000024416	twistnb	19: 2395114 ~ 2404599 (-)
ENSDARG00000043509	rpl11	19: 43780970 ~ 43786940 (+)
ENSDARG00000025850	rps21	23: 9220436 ~ 9228578 (+)
ENSDARG00000037071	rps26	23: 27675581 ~ 27677516 (+)
ENSDARG00000025581	rpl10	23: 19712557 ~ 19715859 (-)
ENSDARG00000058358	krt8	23: 10249626 ~ 10254288 (-)
ENSDARG00000077571	zgc:174862	23: 43320903 ~ 43393589 (-)
ENSDARG00000005513	naca	23: 17865554 ~ 17876777 (+)
ENSDARG00000006353	itga5	23: 33447625 ~ 33558161 (-)
ENSDARG00000001754	noc2l	23: 23126130 ~ 23179417 (-)
ENSDARG00000012820	nop56	21: 11958758 ~ 11970199 (-)
ENSDARG00000006316	rpl23a	21: 26071874 ~ 26074640 (+)
ENSDARG00000007708	nsa2	21: 3789839 ~ 3796461 (-)
ENSDARG00000003920	setb	21: 13224239 ~ 13231101 (-)
ENSDARG00000002593	slc45a2	21: 19445942 ~ 19484289 (+)
ENSDARG00000061794	jam3b	21: 24984970 ~ 25046991 (+)
ENSDARG00000011459	gsna	21: 17572421 ~ 17603218 (-)
ENSDARG00000016484	dkc1	21: 43702010 ~ 43716471 (+)
ENSDARG00000098935	bxdc2	21: 226351 ~ 233282 (-)
ENSDARG00000018334	rpl35	21: 5873227 ~ 5881344 (-)
ENSDARG00000099865	hnrnpabb	21: 3166519 ~ 3175724 (+)
ENSDARG00000036629	rps14	21: 33454147 ~ 33458430 (+)
ENSDARG00000037012	slc3a2b	21: 26720803 ~ 26725478 (+)
ENSDARG00000068732	spry4	21: 44684577 ~ 44691068 (+)
ENSDARG00000012899	ddx49	11: 6869312 ~ 6880725 (-)
ENSDARG00000091298	pmela	11: 3254252 ~ 3272020 (+)
ENSDARG00000014329	npm1a	10: 22034477 ~ 22045119 (+)
ENSDARG00000069065	btg3	10: 28370816 ~ 28380928 (-)
ENSDARG00000041811	rps25	10: 39125637 ~ 39130935 (-)
ENSDARG00000040334	mat2aa	10: 7810455 ~ 7821686 (-)
ENSDARG00000043976	etf1b	10: 21434649 ~ 21444731 (+)
ENSDARG00000010516	rpl21	24: 21621654 ~ 21627293 (+)
ENSDARG00000045372	ngdn	24: 14541013 ~ 14557158 (+)
ENSDARG00000099358	hccsb	24: 31081504 ~ 31092711 (-)
ENSDARG00000005220	pdcd6	24: 12629649 ~ 12689571 (-)
ENSDARG00000045248	h3f3d	24: 37688729 ~ 37693028 (+)
ENSDARG00000018637	sec61g	24: 18444189 ~ 18446604 (-)
ENSDARG00000045399	cct5	24: 16905188 ~ 16912897 (+)
ENSDARG00000044488	pak1ip1	24: 36158745 ~ 36175365 (-)
ENSDARG00000027825	naa50	24: 21174523 ~ 21183891 (+)
ENSDARG00000023028	cdv3	24: 9881219 ~ 9893794 (+)
ENSDARG00000097630	si:ch211-282b22.1	24: 32592748 ~ 32675476 (+)
ENSDARG00000003941	rrs1	24: 23837519 ~ 23839647 (-)
ENSDARG00000019307	dusp5	22: 29911326 ~ 29922872 (-)
ENSDARG00000002710	ncl	22: 36673312 ~ 36690751 (-)
ENSDARG00000054818	rpl32	22: 31039091 ~ 31044066 (+)
ENSDARG00000079783	isg20	25: 19095231 ~ 19100469 (+)
ENSDARG00000045803	mfge8b	25: 19149241 ~ 19192303 (+)
ENSDARG00000103476	trpm1b	25: 34576067 ~ 34615463 (+)
--	ak6	--
--	cirh1a	--
--	plin3	--
--	rpl37.1	--
--	rpl41	--
--	sars	--
--	si:ch211-202a12.4	--
--	si:dkey-226k3.4	--
--	si:dkeyp-1h4.9	--
--	egfp	--
--	brafhuman	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Tumor.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE159709 (melanoma)	Danio rerio	tumor	1	Tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	ENSDARG00000003732 (mitfa)	marker	DOI:10.1038/s41467-021-26614-z
	GSE159709 (melanoma)	Danio rerio	tumor	1	Tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	ENSDARG00000091298 (pmela)	marker	DOI:10.1038/s41467-021-26614-z

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Tumor

Distribution of Tumor in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences