Fish Single-cell RNA Database

CELL TYPE: Epiphysis

Distribution of Epiphysis in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000045758	cracr2ab	4: 11135048 ~ 11148941 (+)
ENSDARG00000045837	si:dkey-14d8.20	4: 5392094 ~ 5494298 (+)
ENSDARG00000069607	zgc:162331	4: 4782721 ~ 4795205 (-)
ENSDARG00000059053	slc13a4	4: 4803698 ~ 4832149 (+)
ENSDARG00000045886	slc38a2	4: 1600034 ~ 1617897 (+)
ENSDARG00000069171	gramd4a	4: 28062473 ~ 28161198 (-)
ENSDARG00000111326	BX323820.1	4: 19903784 ~ 19921410 (-)
ENSDARG00000059409	abcd2	4: 75292781 ~ 75308985 (+)
ENSDARG00000055342	slc16a13	7: 20030888 ~ 20055983 (+)
ENSDARG00000068567	shha	7: 40884012 ~ 40893295 (+)
ENSDARG00000032862	ugt5g1	7: 22688781 ~ 22696987 (+)
ENSDARG00000051939	pcxb	7: 60457138 ~ 60831105 (-)
ENSDARG00000061472	gba2	7: 24645186 ~ 24673416 (+)
ENSDARG00000015349	mfge8a	7: 48788147 ~ 48805181 (-)
ENSDARG00000011259	trpm1a	7: 29312376 ~ 29341364 (-)
ENSDARG00000103736	gramd2aa	7: 53541173 ~ 53626724 (+)
ENSDARG00000029204	tyrp1a	7: 74084203 ~ 74090168 (-)
ENSDARG00000063288	slc2a11b	5: 10014604 ~ 10046183 (+)
ENSDARG00000035601	dao.3	5: 20197138 ~ 20205075 (-)
ENSDARG00000019556	clcn7	3: 27664864 ~ 27709312 (+)
ENSDARG00000059743	tmem98	3: 39099716 ~ 39110228 (+)
ENSDARG00000098224	tlcd4b	3: 14388010 ~ 14452325 (+)
ENSDARG00000010727	ttyh2l	3: 51563695 ~ 51657722 (+)
ENSDARG00000028048	rdh8a	3: 53687645 ~ 53722182 (-)
ENSDARG00000005343	ccdc85al	6: 6736925 ~ 6775821 (-)
ENSDARG00000090793	si:ch211-207j7.2	6: 8079974 ~ 8093993 (+)
ENSDARG00000003732	mitfa	6: 43390387 ~ 43433277 (+)
ENSDARG00000034522	rab6ba	6: 27667359 ~ 27900013 (+)
ENSDARG00000016963	slc16a1a	6: 48978202 ~ 49049019 (+)
ENSDARG00000028862	rdh20	6: 46458416 ~ 46474483 (-)
ENSDARG00000068474	si:dkey-94e7.2	2: 30721070 ~ 30726420 (+)
ENSDARG00000018077	rbp1.1	2: 39028337 ~ 39036604 (-)
ENSDARG00000038867	shhb	2: 30050541 ~ 30055432 (-)
ENSDARG00000075706	si:ch211-106h4.9	2: 31599963 ~ 31664615 (-)
ENSDARG00000018809	abhd3	2: 11848510 ~ 11912347 (-)
ENSDARG00000007480	rpe65a	2: 1428696 ~ 1443692 (-)
ENSDARG00000008457	faah2a	1: 40237276 ~ 40258430 (+)
ENSDARG00000056151	tyrp1b	1: 19332837 ~ 19346048 (+)
ENSDARG00000061985	rbm47	1: 19353048 ~ 19402815 (-)
ENSDARG00000079280	dhrsx	1: 33383644 ~ 33487375 (+)
ENSDARG00000008413	atp11a	1: 46263473 ~ 46401385 (-)
ENSDARG00000074812	fhdc1	1: 25399514 ~ 25438934 (-)
ENSDARG00000077652	lratb.2	1: 10118455 ~ 10124192 (+)
ENSDARG00000036645	rcbtb1	1: 46635236 ~ 46650041 (-)
ENSDARG00000031952	mb	1: 55137943 ~ 55145085 (+)
ENSDARG00000053269	slc2a15b	1: 31573225 ~ 31598417 (+)
ENSDARG00000037278	lrata	1: 25696798 ~ 25698039 (+)
ENSDARG00000102506	lrp2a	9: 48415043 ~ 48672254 (+)
ENSDARG00000005823	slc39a10	9: 24920677 ~ 24951662 (+)
ENSDARG00000040257	slc38a11	9: 50000504 ~ 50032969 (+)
ENSDARG00000042282	itga6a	9: 3429662 ~ 3486488 (+)
ENSDARG00000006008	dct	9: 53327332 ~ 53352682 (+)
ENSDARG00000006220	ugt1a1	9: 9969987 ~ 10003782 (-)
ENSDARG00000034572	gpr143	9: 55056310 ~ 55090829 (+)
ENSDARG00000040280	NA	16: 25231963 ~ 25233515 (-)
ENSDARG00000089213	adam15	16: 28663184 ~ 28709874 (-)
ENSDARG00000002311	fabp11b	16: 16148761 ~ 16152199 (-)
ENSDARG00000069583	zgc:114181	16: 55003121 ~ 55028791 (-)
ENSDARG00000020284	si:ch211-278j3.3	20: 19373428 ~ 19422496 (-)
ENSDARG00000091418	snx17	20: 19436187 ~ 19511700 (-)
ENSDARG00000009499	syne1a	20: 26095530 ~ 26359434 (+)
ENSDARG00000094978	si:ch73-18b11.2	20: 2281933 ~ 2284402 (+)
ENSDARG00000043322	gsx2	20: 22483048 ~ 22484621 (-)
ENSDARG00000042854	ephx1	20: 36628059 ~ 36638179 (+)
ENSDARG00000102612	slc15a4	8: 35809081 ~ 35960987 (-)
ENSDARG00000069478	slc13a3	8: 28667021 ~ 28695383 (+)
ENSDARG00000077709	iqsec2b	8: 36803415 ~ 36978659 (+)
ENSDARG00000033706	adora2aa	8: 30664077 ~ 30684625 (+)
ENSDARG00000003998	phyhipla	17: 20963477 ~ 20979077 (-)
ENSDARG00000014106	cfl2	17: 10007071 ~ 10025234 (-)
ENSDARG00000097683	sptbn5	17: 29124190 ~ 29194219 (-)
ENSDARG00000028740	msnb	14: 9287683 ~ 9336601 (+)
ENSDARG00000089824	lpar4	14: 10487990 ~ 10503888 (-)
ENSDARG00000037097	slc7a2	14: 30367602 ~ 30390145 (-)
ENSDARG00000034757	zdhhc2	14: 30426956 ~ 30452218 (-)
ENSDARG00000043342	gpx3	14: 49439887 ~ 49460409 (-)
ENSDARG00000092071	si:ch211-117n7.6	13: 9889676 ~ 9895628 (-)
ENSDARG00000039832	gsta.2	13: 829585 ~ 832331 (+)
ENSDARG00000039534	rrh	13: 12528043 ~ 12540539 (+)
ENSDARG00000069265	matn3b	13: 32627444 ~ 32635885 (-)
ENSDARG00000069332	tmem72	13: 30704361 ~ 30713236 (-)
ENSDARG00000054890	rgra	13: 29446226 ~ 29455859 (-)
ENSDARG00000086114	CR792417.1	13: 42552495 ~ 42560662 (-)
ENSDARG00000098414	ninl	13: 7171066 ~ 7233811 (-)
ENSDARG00000054048	plin1	18: 25229634 ~ 25279323 (-)
ENSDARG00000052497	zgc:110789	18: 12034985 ~ 12052132 (-)
ENSDARG00000039381	ch25hl1.1	18: 26853891 ~ 26854959 (-)
ENSDARG00000059163	rbp3	12: 2665081 ~ 2670156 (+)
ENSDARG00000045153	slc16a8	12: 19191787 ~ 19198771 (+)
ENSDARG00000099101	gch2	12: 25085751 ~ 25092570 (+)
ENSDARG00000098724	rgrb	12: 48965049 ~ 48970299 (-)
ENSDARG00000087059	selenou1b	12: 47778786 ~ 47782623 (-)
ENSDARG00000100917	slc30a8	19: 46343385 ~ 46362232 (+)
ENSDARG00000034988	asb4	19: 41169996 ~ 41182251 (+)
ENSDARG00000035868	spire1a	19: 32979132 ~ 33072157 (+)
ENSDARG00000059361	slc39a4	19: 1119416 ~ 1127722 (-)
ENSDARG00000017261	gdpd1	15: 16886196 ~ 16894875 (+)
ENSDARG00000039490	pitpnaa	15: 28410664 ~ 28425011 (+)
ENSDARG00000069823	proca1	15: 15445113 ~ 15449929 (-)
ENSDARG00000099563	inpp5ka	15: 33843596 ~ 33865029 (+)
ENSDARG00000076964	cables2a	23: 30898013 ~ 30919307 (+)
ENSDARG00000021494	hnf4a	23: 25832689 ~ 25865856 (+)
ENSDARG00000104936	si:ch211-225h24.2	23: 35402697 ~ 35469859 (+)
ENSDARG00000033760	pmelb	23: 35672542 ~ 35690336 (+)
ENSDARG00000071235	si:ch211-117c9.5	23: 6795531 ~ 6841245 (+)
ENSDARG00000058381	zgc:171775	23: 10146542 ~ 10165033 (+)
ENSDARG00000055523	slc22a6l	21: 28478663 ~ 28494322 (+)
ENSDARG00000052903	rtkn2b	21: 11256425 ~ 11327830 (-)
ENSDARG00000002593	slc45a2	21: 19445942 ~ 19484289 (+)
ENSDARG00000018738	zw10	21: 23036314 ~ 23046606 (-)
ENSDARG00000044387	cldn2	21: 38002879 ~ 38009507 (+)
ENSDARG00000046012	slc47a1	21: 39941184 ~ 39976240 (+)
ENSDARG00000117130	BX936439.1	21: 36581384 ~ 36601799 (+)
ENSDARG00000057575	pnp4a	11: 24251141 ~ 24299538 (+)
ENSDARG00000044803	dhrs3b	11: 28590733 ~ 28614608 (-)
ENSDARG00000097827	lrp1aa	11: 1628538 ~ 1864288 (+)
ENSDARG00000091298	pmela	11: 3254252 ~ 3272020 (+)
ENSDARG00000063433	atp2b2	11: 1148701 ~ 1291012 (-)
ENSDARG00000078618	inpp5kb	10: 24302433 ~ 24319526 (-)
ENSDARG00000104387	NA	10: 44811700 ~ 44901444 (+)
ENSDARG00000043901	ugt5g2	10: 22082596 ~ 22086626 (-)
ENSDARG00000055339	si:ch73-1a9.4	10: 39091353 ~ 39123213 (+)
ENSDARG00000056915	si:ch211-237l4.6	10: 22782522 ~ 22786450 (+)
ENSDARG00000044295	pip5k1ba	10: 15881309 ~ 15919839 (-)
ENSDARG00000074611	wdr37	24: 3478871 ~ 3527978 (+)
ENSDARG00000012625	prkag2a	24: 28252520 ~ 28381437 (-)
ENSDARG00000098245	cidea	24: 2949937 ~ 2959182 (-)
ENSDARG00000060668	tm4sf18	22: 38159823 ~ 38168571 (+)
ENSDARG00000008306	rdh5	22: 10110358 ~ 10121880 (-)
ENSDARG00000029057	tm6sf2	22: 17784414 ~ 17823608 (+)
ENSDARG00000054858	tp53bp2b	22: 28803739 ~ 28849279 (+)
ENSDARG00000071518	krt222	22: 11717429 ~ 11729350 (-)
ENSDARG00000016598	ckmt1	25: 21829777 ~ 21847553 (+)
ENSDARG00000051874	stra6	25: 22571475 ~ 22634675 (+)
ENSDARG00000093640	ugt5a2	25: 29401246 ~ 29415369 (-)
ENSDARG00000102229	mapk8ip1a	25: 13801716 ~ 13842618 (-)
ENSDARG00000001879	nav2b	25: 14510773 ~ 14637660 (-)
ENSDARG00000045808	rlbp1b	25: 19105804 ~ 19118127 (+)
ENSDARG00000062059	si:ch211-236l14.4	25: 23656879 ~ 23745765 (-)
ENSDARG00000103476	trpm1b	25: 34576067 ~ 34615463 (+)
--	hist1h4l.10	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Epiphysis.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
PRJNA564810 (5dpf)	Danio rerio	embryo	29	Epiphysis	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000045153 (slc16a8)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (5dpf)	Danio rerio	embryo	29	Epiphysis	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000078618 (inpp5kb)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (5dpf)	Danio rerio	embryo	29	Epiphysis	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000087059 (selenou1b)	marker	DOI:10.1093/g3journal/jkac062
PRJNA564810 (5dpf)	Danio rerio	embryo	29	Epiphysis	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	ENSDARG00000028862 (rdh20)	marker	DOI:10.1093/g3journal/jkac062

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Epiphysis

Distribution of Epiphysis in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences