GENE ID: ENSDARG00000099572


Symbol Location Gene type Genome version Species
hmgn2 16: 51180938 ~ 51184126 (+) protein_coding GRCz11 Danio rerio

MARKER



EXPRESSION


Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Progenitors (cluster: 16)
Nascent neurons (cluster: 7)
Progenitors (cluster: 8)
potential marker
potential marker
potential marker
NA
NA
NA
GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment Progenitors (cluster: 3)
potential marker
NA
GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Progenitors (cluster: 3)
Progenitors (cluster: 7)
potential marker
potential marker
NA
NA
GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Progenitors (cluster: 4)
potential marker
NA
PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 5)
potential marker
NA
PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 5)
potential marker
NA
GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/-
GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Neuron (cluster: 2)
potential marker
NA
GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neuron (cluster: 5)
potential marker
NA
GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neuron (cluster: 2)
potential marker
NA
GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled) Ectoderm cells (cluster: 1)
potential marker
NA
GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells
PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells PMN progenitors (cluster: 1)
potential marker
NA
PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Ionocyte progenitors (cluster: 3)
potential marker
NA
PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 2)
Neuron (cluster: 3)
potential marker
potential marker
NA
NA
PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 14)
Neuroblast (cluster: 3)
Neuron (cluster: 4)
Cranial neural crest (cluster: 6)
potential marker
potential marker
potential marker
potential marker
NA
NA
NA
NA
PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Neuroblast (cluster: 1)
Neuroblast (cluster: 10)
Neuron (cluster: 4)
potential marker
potential marker
potential marker
NA
NA
NA
GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Proliferating cells (cluster: 5)
potential marker
NA
GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Optic stalk (ventral diencephalon) (cluster: 5)
potential marker
NA
GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Hindbrain rhombomere (cluster: 1)
Hindbrain (cluster: 2)
Diencephalon (cluster: 3)
potential marker
potential marker
potential marker
NA
NA
NA
GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Cycling progenitors (cluster: 1)
Cycling progenitors (cluster: 2)
Telencephalon (cluster: 3)
potential marker
potential marker
potential marker
NA
NA
NA
GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Progenitors (cluster: 2)
potential marker
NA
GSE158142 (24hpf) head baseline 24hpf, untreatment Progenitors (cluster: 1)
potential marker
NA
GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Retina neuroblasts (cluster: 6)
Progenitors (cluster: 9)
potential marker
potential marker
NA
NA
GSE158142 (2dpf) head baseline 2dpf, untreatment Retina neuroblasts (cluster: 7)
potential marker
NA
GSE158142 (3dpf) head baseline 3dpf, untreatment Neuron (cluster: 3)
potential marker
NA
PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Macrophages (cluster: 9)
potential marker
NA
PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 9)
potential marker
NA
PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Endocardial endothelial cells (cluster: 1)
potential marker
NA
GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC Immune cells (cluster: 4)
potential marker
NA
GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC Immune cells (cluster: 2)
potential marker
NA
PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae Support cells (cluster: 2)
Support cells (cluster: 7)
potential marker
potential marker
NA
NA
PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Neuron (cluster: 3)
Neuronal precursor cells (cluster: 6)
potential marker
potential marker
NA
NA
PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Neuron (cluster: 6)
potential marker
NA
GSE175929 (5mpf) retina baseline 5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg Bipolar cells (cluster: 5)
potential marker
NA
GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Retinal progenitors (cluster: 1)
Retinal progenitors (cluster: 3)
potential marker
potential marker
NA
NA
GSE122680 (1.5dpf) retina baseline 1.5dpf, WT, untreatment Retinal progenitors (cluster: 1)
Bipolar cells (cluster: 5)
potential marker
potential marker
NA
NA
GSE122680 (3dpf) retina baseline 3dpf, WT, untreatment Retinal progenitors (cluster: 1)
potential marker
NA
GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment Bipolar cells (cluster: 2)
potential marker
NA
GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment Retinal progenitors (cluster: 3)
Retinal progenitors (cluster: 4)
Retinal progenitors (cluster: 3)
Retinal progenitors (cluster: 4)
potential marker
potential marker
potential marker
potential marker
NA
NA
NA
NA
GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Floor plate (cluster: 13)
Spinal cord (cluster: 2)
Fibroblasts (cluster: 5)
potential marker
potential marker
potential marker
NA
NA
NA
GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone Schwann cells (cluster: 1)
Proliferating progenitors (cluster: 14)
Neuron (cluster: 15)
potential marker
potential marker
potential marker
NA
NA
NA
GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells Interface (cluster: 2)
potential marker
NA
PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors Melanoma cells (cluster: 4)
potential marker
NA
PRJNA641144 (P_PRO) tumor disease adult, ZMEL1-PRO cells in vivo primary tumors Melanoma cells (cluster: 2)
potential marker
NA
PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 5)
potential marker
NA
PRJNA641144 (M_PRO) tumor disease adult, ZMEL1-PRO cells in vivo metastases Melanoma cells (cluster: 3)
potential marker
NA
PRJNA641144 (D_INV) tumor disease adult, ZMEL1-INV cells in vitro individual culture Melanoma cells (cluster: 4)
potential marker
NA
PRJNA641144 (D_PRO) tumor disease adult, ZMEL1-PRO cells in vitro individual culture Melanoma cells (cluster: 3)
potential marker
NA
PRJNA641144 (C_INV) tumor disease adult, ZMEL1-INV cells in vitro co-culture Melanoma cells (cluster: 3)
Melanoma cells (cluster: 4)
potential marker
potential marker
NA
NA
PRJNA641144 (C_PRO) tumor disease adult, ZMEL1-PRO cells in vitro co-culture Melanoma cells (cluster: 2)
Melanoma cells (cluster: 4)
potential marker
potential marker
NA
NA
GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Proliferating cells (cluster: 13)
Neuron (cluster: 2)
potential marker
potential marker
NA
NA
GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Multipotent cells (cluster: 8)
potential marker
NA
GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Multipotent cells (cluster: 4)
potential marker
NA
GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Multipotent cells (cluster: 2)
potential marker
NA
GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Multipotent cells (cluster: 6)
potential marker
NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 3)
potential marker
NA
GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- HSPCs (cluster: 5)
Multipotent cells (cluster: 7)
potential marker
potential marker
NA
NA
PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
GSE151354 (wild type) cartilage baseline 21dpf, wild type
GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+
GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
PRJNA734348 (dome, dnmt1) embryo growth 4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)