Fish Single-cell RNA Database

CELL TYPE: Interface

Distribution of Interface in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000004713	mad2l1	7: 57629370 ~ 57637779 (-)
ENSDARG00000042894	tyms	7: 71535045 ~ 71541329 (+)
ENSDARG00000051923	ccnb1	5: 54711027 ~ 54714789 (-)
ENSDARG00000100573	ckap2l	5: 13549603 ~ 13561074 (+)
ENSDARG00000044437	cdca5	5: 67175283 ~ 67180800 (-)
ENSDARG00000016594	haus4	5: 1493767 ~ 1515857 (+)
ENSDARG00000038066	kpna2	3: 25369965 ~ 25377163 (-)
ENSDARG00000091754	CT573476.1	3: 52892671 ~ 52899394 (-)
ENSDARG00000052103	dtymk	6: 27104962 ~ 27108844 (-)
ENSDARG00000114670	ube2c	6: 55287823 ~ 55297274 (-)
ENSDARG00000005058	ncapd2	2: 44749201 ~ 44777679 (-)
ENSDARG00000063385	cenpe	1: 260039 ~ 296057 (+)
ENSDARG00000017744	smc2	1: 19535120 ~ 19561801 (+)
ENSDARG00000074379	knstrn	1: 11107688 ~ 11117930 (+)
ENSDARG00000029722	hmgb2a	1: 38169512 ~ 38171787 (-)
ENSDARG00000058471	plk1	1: 9153141 ~ 9161843 (+)
ENSDARG00000024681	pane1	1: 55161083 ~ 55166611 (-)
ENSDARG00000070109	ncapg	1: 23559478 ~ 23573230 (+)
ENSDARG00000078433	spc25	9: 48819280 ~ 48835494 (+)
ENSDARG00000070656	si:ch211-69g19.2	16: 12052010 ~ 12060782 (-)
ENSDARG00000099572	hmgn2	16: 51180938 ~ 51184126 (+)
ENSDARG00000041411	rad51	20: 46427963 ~ 46442137 (+)
ENSDARG00000095046	pold2	8: 36570508 ~ 36579527 (+)
ENSDARG00000055133	cenpf	17: 32720413 ~ 32743249 (-)
ENSDARG00000087554	cdk1	17: 20923691 ~ 20929461 (+)
ENSDARG00000010948	kif11	17: 19481049 ~ 19497006 (+)
ENSDARG00000070833	lin52	17: 31667625 ~ 31695257 (-)
ENSDARG00000075421	pttg1	14: 34558480 ~ 34561282 (+)
ENSDARG00000077822	si:dkey-6i22.5	14: 22109241 ~ 22118055 (-)
ENSDARG00000103996	spdl1	14: 38810385 ~ 38843690 (-)
ENSDARG00000089637	rnaseh2c	14: 35409323 ~ 35414559 (-)
ENSDARG00000037640	aurkb	14: 240487 ~ 246342 (-)
ENSDARG00000011094	ccna2	14: 46354648 ~ 46374870 (-)
ENSDARG00000005454	tacc3	13: 35880573 ~ 35892305 (-)
ENSDARG00000002403	nusap1	13: 33251721 ~ 33256667 (-)
ENSDARG00000088130	si:dkey-30c15.10	18: 7425222 ~ 7448047 (-)
ENSDARG00000014943	kif23	18: 20435821 ~ 20458840 (-)
ENSDARG00000075621	birc5a	12: 34429702 ~ 34435604 (-)
ENSDARG00000024488	top2a	12: 10706772 ~ 10740236 (+)
ENSDARG00000045167	dlgap5	12: 17633354 ~ 17655683 (-)
ENSDARG00000091150	mki67	12: 10366617 ~ 10381282 (-)
ENSDARG00000070959	si:ch211-288g17.3	19: 9455218 ~ 9460322 (+)
ENSDARG00000060917	anln	19: 35433155 ~ 35450857 (-)
ENSDARG00000001558	kifc1	19: 6990970 ~ 7000603 (+)
ENSDARG00000004169	stmn1a	19: 17205143 ~ 17210928 (-)
ENSDARG00000007971	cks1b	19: 7835025 ~ 7838232 (+)
ENSDARG00000043137	cdca8	19: 47771659 ~ 47782916 (-)
ENSDARG00000078654	tpx2	23: 32028574 ~ 32039790 (+)
ENSDARG00000060394	mtfr2	23: 31901350 ~ 31913289 (-)
ENSDARG00000015460	racgap1	23: 33757173 ~ 33775309 (-)
ENSDARG00000053990	hmgb2b	23: 45025909 ~ 45029559 (+)
ENSDARG00000063285	ube2t	23: 5104743 ~ 5108055 (+)
ENSDARG00000034624	nuf2	11: 429776 ~ 438518 (-)
ENSDARG00000087393	prr11	10: 35250205 ~ 35257561 (-)
ENSDARG00000103919	si:ch73-1a9.3	10: 39084354 ~ 39087854 (+)
ENSDARG00000039354	ska1	10: 17543276 ~ 17550931 (-)
ENSDARG00000086112	si:ch211-266i6.3	10: 32050906 ~ 32058078 (+)
ENSDARG00000087238	si:ch211-161h7.4	24: 20892782 ~ 20908395 (-)
ENSDARG00000062152	chaf1a	22: 22276283 ~ 22301929 (-)
ENSDARG00000103754	aspm	22: 23546926 ~ 23582605 (+)
ENSDARG00000071410	cks2	22: 21313332 ~ 21314860 (-)
ENSDARG00000114405	zgc:194989	25: 35105627 ~ 35106783 (-)
ENSDARG00000099194	CABZ01058261.1	25: 3648497 ~ 3672560 (+)
ENSDARG00000102748	CABZ01074745.1	KN149951.1: 442 ~ 4132 (+)
--	si:dkey-108k21.23	--
--	stra13	--
--	apitd1	--
--	h2afvb	--
--	zgc:174160	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Interface.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE159709 (melanoma)	Danio rerio	tumor	2	Interface	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	ENSDARG00000016594 (haus4)	marker	DOI:10.1038/s41467-021-26614-z

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Interface

Distribution of Interface in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences