Fish Single-cell RNA Database

CELL TYPE: Retina neuroblasts

Distribution of Retina neuroblasts in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000007315	tmpoa	4: 16857722 ~ 16876336 (-)
ENSDARG00000038386	ascl1a	4: 17417111 ~ 17419193 (+)
ENSDARG00000004713	mad2l1	7: 57629370 ~ 57637779 (-)
ENSDARG00000036180	ccnb2	7: 30626378 ~ 30631119 (+)
ENSDARG00000005993	prc1b	7: 50353297 ~ 50367642 (-)
ENSDARG00000034855	ccnb3	7: 22981441 ~ 23006732 (+)
ENSDARG00000006487	anp32a	7: 33345624 ~ 33351532 (-)
ENSDARG00000058369	mex3b	7: 12061787 ~ 12065668 (-)
ENSDARG00000052091	rbpjb	7: 62080456 ~ 62206933 (+)
ENSDARG00000040224	krcp	7: 24881680 ~ 24888634 (+)
ENSDARG00000010591	foxn4	5: 19385503 ~ 19400166 (-)
ENSDARG00000051923	ccnb1	5: 54711027 ~ 54714789 (-)
ENSDARG00000058128	msna	5: 22133153 ~ 22174037 (+)
ENSDARG00000100573	ckap2l	5: 13549603 ~ 13561074 (+)
ENSDARG00000035519	histh1l	5: 27432958 ~ 27434351 (+)
ENSDARG00000068759	si:ch211-244o22.2	5: 14477282 ~ 14521500 (-)
ENSDARG00000092354	si:ch211-284e13.6	5: 38110384 ~ 38122126 (-)
ENSDARG00000038066	kpna2	3: 25369965 ~ 25377163 (-)
ENSDARG00000006260	tuba8l4	6: 6972953 ~ 6976107 (-)
ENSDARG00000012485	aurka	6: 60125033 ~ 60139655 (+)
ENSDARG00000097082	im:7152348	6: 27884372 ~ 27891961 (-)
ENSDARG00000114670	ube2c	6: 55287823 ~ 55297274 (-)
ENSDARG00000057013	cadm3	2: 44049081 ~ 44183613 (-)
ENSDARG00000020289	pif1	2: 17096161 ~ 17115256 (-)
ENSDARG00000100741	cdc20	2: 19217586 ~ 19234469 (-)
ENSDARG00000019335	hes6	2: 48288461 ~ 48304696 (+)
ENSDARG00000101766	ptmab	2: 5131964 ~ 5135125 (-)
ENSDARG00000010791	dla	1: 54013457 ~ 54026352 (+)
ENSDARG00000017744	smc2	1: 19535120 ~ 19561801 (+)
ENSDARG00000023330	anp32b	1: 26660369 ~ 26664840 (-)
ENSDARG00000029722	hmgb2a	1: 38169512 ~ 38171787 (-)
ENSDARG00000058471	plk1	1: 9153141 ~ 9161843 (+)
ENSDARG00000024681	pane1	1: 55161083 ~ 55166611 (-)
ENSDARG00000070109	ncapg	1: 23559478 ~ 23573230 (+)
ENSDARG00000019566	neurod1	9: 44291721 ~ 44295071 (-)
ENSDARG00000078433	spc25	9: 48819280 ~ 48835494 (+)
ENSDARG00000040946	olig2	9: 32751428 ~ 32753535 (-)
ENSDARG00000092651	si:dkey-57a22.11	9: 21977383 ~ 21983659 (+)
ENSDARG00000006092	rad21a	16: 48409066 ~ 48430272 (-)
ENSDARG00000070656	si:ch211-69g19.2	16: 12052010 ~ 12060782 (-)
ENSDARG00000099572	hmgn2	16: 51180938 ~ 51184126 (+)
ENSDARG00000070108	dek	16: 41015163 ~ 41030634 (+)
ENSDARG00000041361	ttk	16: 5110455 ~ 5143176 (-)
ENSDARG00000010420	ndrg1b	16: 31511739 ~ 31517227 (+)
ENSDARG00000091756	insm1a	20: 48482925 ~ 48485354 (-)
ENSDARG00000014013	lbr	20: 36393912 ~ 36416922 (-)
ENSDARG00000031316	six6b	20: 20531002 ~ 20533865 (-)
ENSDARG00000010408	igsf9b	8: 4856440 ~ 4892913 (-)
ENSDARG00000031495	seta	8: 2585256 ~ 2591654 (-)
ENSDARG00000068168	hes2.2	8: 46896445 ~ 46897734 (-)
ENSDARG00000074897	hes2.1	8: 46921333 ~ 46926259 (-)
ENSDARG00000098591	tubb2b	8: 52713232 ~ 52715911 (-)
ENSDARG00000042708	tuba8l	8: 28345352 ~ 28349859 (-)
ENSDARG00000100019	arhgap11a	17: 92784 ~ 114121 (-)
ENSDARG00000055133	cenpf	17: 32720413 ~ 32743249 (-)
ENSDARG00000087554	cdk1	17: 20923691 ~ 20929461 (+)
ENSDARG00000010948	kif11	17: 19481049 ~ 19497006 (+)
ENSDARG00000056292	vsx1	17: 21063403 ~ 21066105 (-)
ENSDARG00000001313	g2e3	17: 28798725 ~ 28811747 (-)
ENSDARG00000007697	fabp7a	17: 15433518 ~ 15435887 (+)
ENSDARG00000075421	pttg1	14: 34558480 ~ 34561282 (+)
ENSDARG00000056130	neurog1	14: 26703331 ~ 26704829 (-)
ENSDARG00000002344	tubb4b	14: 5861435 ~ 5865146 (+)
ENSDARG00000098350	mxd3	14: 16068318 ~ 16082806 (-)
ENSDARG00000053569	sox3	14: 32742701 ~ 32744464 (-)
ENSDARG00000021794	hmmr	14: 28545198 ~ 28562971 (+)
ENSDARG00000057026	ran	14: 21685537 ~ 21693914 (+)
ENSDARG00000037640	aurkb	14: 240487 ~ 246342 (-)
ENSDARG00000011094	ccna2	14: 46354648 ~ 46374870 (-)
ENSDARG00000093597	oip5	13: 33256847 ~ 33259799 (+)
ENSDARG00000005454	tacc3	13: 35880573 ~ 35892305 (-)
ENSDARG00000006003	mycla	13: 35904335 ~ 35908275 (-)
ENSDARG00000010792	cdc25b	13: 14915344 ~ 14929236 (-)
ENSDARG00000058008	six3a	13: 10258007 ~ 10261383 (-)
ENSDARG00000069552	atoh7	13: 25449681 ~ 25450725 (+)
ENSDARG00000039020	fbxo5	13: 46941930 ~ 46958802 (+)
ENSDARG00000020219	dld	13: 6075572 ~ 6081803 (-)
ENSDARG00000028228	zbtb18	13: 11436130 ~ 11445034 (+)
ENSDARG00000002403	nusap1	13: 33251721 ~ 33256667 (-)
ENSDARG00000078847	si:dkey-238o13.4	18: 14671789 ~ 14677936 (-)
ENSDARG00000014943	kif23	18: 20435821 ~ 20458840 (-)
ENSDARG00000075621	birc5a	12: 34429702 ~ 34435604 (-)
ENSDARG00000102624	kif22	12: 5048044 ~ 5071836 (+)
ENSDARG00000102349	cep55l	12: 5102670 ~ 5113389 (+)
ENSDARG00000024488	top2a	12: 10706772 ~ 10740236 (+)
ENSDARG00000045167	dlgap5	12: 17633354 ~ 17655683 (-)
ENSDARG00000054879	six3b	12: 25600685 ~ 25603341 (+)
ENSDARG00000071694	ndc80	12: 10353333 ~ 10365969 (-)
ENSDARG00000091150	mki67	12: 10366617 ~ 10381282 (-)
ENSDARG00000054804	anp32e	19: 42328423 ~ 42341815 (+)
ENSDARG00000001558	kifc1	19: 6990970 ~ 7000603 (+)
ENSDARG00000092638	ptprua	19: 16222618 ~ 16657563 (+)
ENSDARG00000007971	cks1b	19: 7835025 ~ 7838232 (+)
ENSDARG00000078069	rrm2	19: 47564890 ~ 47571808 (-)
ENSDARG00000099793	cspg5b	19: 19278082 ~ 19339337 (-)
ENSDARG00000043137	cdca8	19: 47771659 ~ 47782916 (-)
ENSDARG00000030479	hmgb1b	15: 31513065 ~ 31516583 (-)
ENSDARG00000006120	tbx2b	15: 27364394 ~ 27371340 (+)
ENSDARG00000097102	si:ch73-281n10.2	15: 5898410 ~ 5901514 (-)
ENSDARG00000042835	tfdp2	15: 4421797 ~ 4528387 (-)
ENSDARG00000099918	arl4aa	15: 34069746 ~ 34074979 (+)
ENSDARG00000078748	si:ch211-137a8.4	15: 29085955 ~ 29091807 (+)
ENSDARG00000002336	dlc	15: 20463448 ~ 20468302 (-)
ENSDARG00000036675	hnrnpa1b	23: 36306539 ~ 36310418 (+)
ENSDARG00000078654	tpx2	23: 32028574 ~ 32039790 (+)
ENSDARG00000094977	si:ch211-156j22.4	23: 27575539 ~ 27589829 (-)
ENSDARG00000028335	hmga1a	23: 3751451 ~ 3759692 (-)
ENSDARG00000045367	tuba1b	23: 35713557 ~ 35716519 (+)
ENSDARG00000003469	neurod4	23: 28343988 ~ 28347039 (-)
ENSDARG00000020887	armc1l	23: 31912882 ~ 31919155 (+)
ENSDARG00000053990	hmgb2b	23: 45025909 ~ 45029559 (+)
ENSDARG00000054929	zgc:110540	21: 26485849 ~ 26490186 (-)
ENSDARG00000014017	rrm1	21: 30772043 ~ 30787414 (-)
ENSDARG00000005098	zgc:86764	21: 20309085 ~ 20322816 (-)
ENSDARG00000016725	gadd45gb.1	21: 20715020 ~ 20716561 (+)
ENSDARG00000010385	sept4a	21: 39512437 ~ 39546737 (-)
ENSDARG00000037009	banf1	21: 26709801 ~ 26715270 (-)
ENSDARG00000034624	nuf2	11: 429776 ~ 438518 (-)
ENSDARG00000088178	tp53inp2	11: 25257022 ~ 25266235 (+)
ENSDARG00000032705	foxg1b	11: 43114108 ~ 43116249 (+)
ENSDARG00000014059	cldn5b	10: 43994471 ~ 43996117 (+)
ENSDARG00000087238	si:ch211-161h7.4	24: 20892782 ~ 20908395 (-)
ENSDARG00000058039	bhlhe22	24: 24461341 ~ 24463346 (+)
ENSDARG00000101362	mibp	22: 5118361 ~ 5122557 (+)
ENSDARG00000103754	aspm	22: 23546926 ~ 23582605 (+)
ENSDARG00000071410	cks2	22: 21313332 ~ 21314860 (-)
ENSDARG00000102594	zgc:194627	22: 5433093 ~ 5441893 (-)
ENSDARG00000039880	arpp19b	25: 7653902 ~ 7663608 (-)
ENSDARG00000100918	prc1a	25: 7435291 ~ 7461466 (+)
--	rrm2.1	--
--	cdc14b.1	--
--	fam60al.1	--
--	h1f0	--
--	h2afva	--
--	h2afvb	--
--	h3f3a	--
--	incenp	--
--	setd8b	--
--	sgol1	--
--	si: dkey-225f5.4	--
--	otx2	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Retina neuroblasts.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE158142 (1.5dpf)	Danio rerio	head	6	Retina neuroblasts	baseline	1.5dpf, untreatment	ENSDARG00000068168 (hes2.2)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (1.5dpf)	Danio rerio	head	6	Retina neuroblasts	baseline	1.5dpf, untreatment	ENSDARG00000056292 (vsx1)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (1.5dpf)	Danio rerio	head	6	Retina neuroblasts	baseline	1.5dpf, untreatment	ENSDARG00000010591 (foxn4)	marker	DOI:10.1016/j.neuron.2020.09.023
GSE158142 (2dpf)	Danio rerio	head	7	Retina neuroblasts	baseline	2dpf, untreatment	ENSDARG00000068168 (hes2.2)	marker	DOI:10.1016/j.neuron.2020.09.023

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Retina neuroblasts

Distribution of Retina neuroblasts in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences