GENE ID: ENSDARG00000054616


Symbol Location Gene type Genome version Species
cldni 3: 30921246 ~ 30927002 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000054616 (cldni), yellow represents other genes.
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  • MARKER



    EXPRESSION


    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Epidermal cells (cluster: 4)
    marker
    DOI:10.1126/science.aar3131
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Epidermal cells (cluster: 10)
    marker
    DOI:10.1016/j.neuron.2020.09.023
    GSE158142 (2dpf) head baseline 2dpf, untreatment Epidermal cells (cluster: 5)
    marker
    DOI:10.1016/j.neuron.2020.09.023
    PRJNA415636 (pancreas, liver) hepatopancreas baseline adult, Zebrabow M, pancreas and liver Pancreas endocrine cells (cluster: 1)
    marker
    DOI:10.1038/nbt.4124
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Pancreas endocrine cells (cluster: 1)
    marker
    DOI:10.1038/nbt.4124
    GSE152982 (wild type) trunk baseline 1.25dpf, untreatment Epidermal cells (cluster: 3)
    marker
    DOI:10.1371/journal.pone.0254024
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Microglia (cluster: 18)
    potential marker
    NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Macrophages (cluster: 14)
    Epidermal cells (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Macrophages (cluster: 13)
    Myeloid cells (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Epidermal cells (cluster: 8)
    potential marker
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Epidermal cells (cluster: 11)
    Macrophages (cluster: 18)
    potential marker
    potential marker
    NA
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
    potential marker
    NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
    potential marker
    NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Epithelial cells (cluster: 4)
    potential marker
    NA
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo EVL, Periderm (cluster: 3)
    Epidermal cells (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells SHFP (cluster: 10)
    potential marker
    NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Skin (cluster: 10)
    potential marker
    NA
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Epithelial cells (cluster: 7)
    potential marker
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 9)
    potential marker
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 15)
    Epidermal cells (cluster: 16)
    potential marker
    potential marker
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 12)
    Epidermal cells (cluster: 22)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Epidermal cells (cluster: 6)
    Epidermal cells (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Epidermal cells (cluster: 12)
    Placode (cluster: 5)
    potential marker
    potential marker
    NA
    NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Epidermal cells (cluster: 11)
    Epidermal cells (cluster: 12)
    Placode (cluster: 4)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Epidermal cells (cluster: 12)
    Epidermal cells (cluster: 3)
    Epidermal cells (cluster: 8)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Epidermal cells (cluster: 10)
    Epidermal cells (cluster: 5)
    Epidermal cells (cluster: 7)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Epidermal cells (cluster: 10)
    potential marker
    NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Epidermal cells (cluster: 4)
    potential marker
    NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury
    GSE150498 (untreated ctrl) intestine baseline 6dpf, untreated ctrl Epithelial cells (cluster: 11)
    potential marker
    NA
    GSE150498 (nod2-|-, 1X DSS) intestine disease 6dpf, nod2-/-, 1X DSS Epithelial cells (cluster: 4)
    potential marker
    NA
    GSE123241 (fgf3 siblings) neuromast regeneration 5dpf, fgf3 siblings during sensory hair cell regeneration, lateral line sensory
    PRJNA605021 (supporting cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae Epidermal cells (cluster: 1)
    Support cells (cluster: 3)
    Epidermal cells (cluster: 6)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    PRJNA605021 (hair cells) neuromast baseline 7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae Epidermal cells (cluster: 2)
    potential marker
    NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Basal cells (cluster: 2)
    potential marker
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Basal cells (cluster: 4)
    potential marker
    NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Basal cells (cluster: 6)
    potential marker
    NA
    GSE122680 (24hpf) retina baseline 24hpf, WT, untreatment Amacrine cells (cluster: 7)
    potential marker
    NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Non-follicular epithelium (cluster: 5)
    potential marker
    NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Non-follicular epithelium (cluster: 3)
    potential marker
    NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells Macrophages (cluster: 4)
    potential marker
    NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Epidermal cells (cluster: 14)
    Epidermal cells (cluster: 29)
    potential marker
    potential marker
    NA
    NA
    GSE158099 (WT) whole body baseline 2.5dpf, cd41:GFPlow-WT Epithelial cells (cluster: 4)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Epithelial cells (cluster: 1)
    potential marker
    NA
    GSE158099 (WT) whole body baseline 6dpf, cd41:GFPlow-WT Epithelial cells (cluster: 7)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- Epithelial cells (cluster: 3)
    potential marker
    NA
    GSE158099 (WT) whole body baseline 10dpf, cd41:GFPlow-WT Multipotent cells (cluster: 3)
    Macrophages (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Multipotent cells (cluster: 2)
    Macrophages (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain
    GSE158142 (5dpf) brain, eye baseline 5dpf, untreatment
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment
    GSE151354 (wild type) cartilage baseline 21dpf, wild type
    GSE151354 (nkx3.2 mutant) cartilage growth 21dpf, nkx3.2 mutant
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
    PRJNA706197 (1.25dpf) embryo baseline 1.25dpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (14hpf) embryo baseline 14hpf, FACS sorted sox10:nEOS cells
    PRJNA656271 (1.5dpf) embryo baseline 1.5dpf, FACS-isolated EGFP+ cells
    PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    PRJNA706197 (20hpf) embryo baseline 20hpf, FACS sorted sox10:nEOS cells
    PRJNA734348 (shield, dnmt1) embryo growth 6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells
    PRJNA706197 (24hpf) embryo baseline 24hpf, FACS sorted sox10:nEOS cells
    PRJNA706197 (12hpf) embryo baseline 12hpf, FACS sorted sox10:nEOS cells
    GSE158849 (unlabeled) embryo baseline 6hpf, WT, 4sUTP injected (unlabeled)
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment
    GSE150498 (nod2-|-, 2X DSS+BZA) intestine disease 6dpf, nod2-/-, 2X DSS+BZA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS
    GSE150498 (nod2-|-, 2X DSS) intestine disease 6dpf, nod2-/-, 2X DSS