GENE ID: ENSDARG00000041959


Symbol Location Gene type Genome version Species
cxcr4b 9: 10692905 ~ 10694930 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000041959 (cxcr4b), yellow represents other genes.
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  • MARKER



    EXPRESSION


    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Immune cells (cluster: 4)
    Immune cells (cluster: 11)
    Immune cells (cluster: 20)
    marker
    marker
    marker
    DOI:10.1038/nature25969
    DOI:10.1038/nature25969
    DOI:10.1038/nature25969
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Immune cells (cluster: 4)
    Immune cells (cluster: 8)
    Immune cells (cluster: 10)
    Immune cells (cluster: 12)
    Immune cells (cluster: 19)
    Immune cells (cluster: 20)
    marker
    marker
    marker
    marker
    marker
    marker
    DOI:10.1038/nature25969
    DOI:10.1038/nature25969
    DOI:10.1002/jbmr.4042
    DOI:10.1038/nature25969
    DOI:10.1016/j.celrep.2019.04.030
    DOI:10.1038/nature25969
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Immune cells (cluster: 7)
    marker
    DOI:10.15252/embr.202152901
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Microglia (cluster: 4)
    Lymphocyte cells (cluster: 6)
    potential marker
    potential marker
    NA
    NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 5)
    Myeloid cells (cluster: 6)
    Myeloid cells (cluster: 8)
    Epidermal cells (cluster: 9)
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Myeloid cells (cluster: 4)
    Myeloid cells (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Immune cells (cluster: 5)
    potential marker
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 5)
    potential marker
    NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    potential marker
    NA
    GSE173972 (KO, ezh1-|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    potential marker
    NA
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled)
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells Less-differentiated SHFPs (cluster: 4)
    Endothelium (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells Proliferative SHFPs (cluster: 9)
    potential marker
    NA
    PRJNA734348 (shield, control) embryo baseline 6hpf, shield, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV) Ectoderm cells (cluster: 2)
    potential marker
    NA
    PRJNA656271 (24hpf) embryo baseline 24hpf, FACS-isolated EGFP+ cells PMN progenitors (cluster: 3)
    potential marker
    NA
    PRJNA656271 (2dpf) embryo baseline 2dpf, FACS-isolated EGFP+ cells
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Endothelium (cluster: 3)
    potential marker
    NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Multipotent cells (cluster: 14)
    Monocytes (cluster: 26)
    Leukocytes (cluster: 27)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Neuron (cluster: 8)
    potential marker
    NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Neuron (cluster: 13)
    potential marker
    NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Neuron (cluster: 11)
    potential marker
    NA
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Neuron (cluster: 9)
    potential marker
    NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Placode (cluster: 15)
    potential marker
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Neuron (cluster: 9)
    potential marker
    NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Neutrophils (cluster: 10)
    potential marker
    NA
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Macrophages (cluster: 6)
    Immune cells (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Macrophages (cluster: 2)
    Coronary endothelial cells (cluster: 5)
    Macrophages (cluster: 6)
    Macrophages (cluster: 9)
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Macrophages (cluster: 1)
    Immune cells (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Immune cells (cluster: 12)
    Macrophages (cluster: 5)
    Macrophages (cluster: 7)
    Neutrophils (cluster: 9)
    potential marker
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    NA
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 2)
    Macrophages (cluster: 5)
    Macrophages (cluster: 9)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Macrophages (cluster: 2)
    Immune cells (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Macrophages (cluster: 6)
    Immune cells (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    PRJNA415636 (heart, blood) heart, blood baseline adult, Zebrabow M, heart and blood B cells (cluster: 13)
    T cells (cluster: 7)
    Macrophages (cluster: 9)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    PRJNA754013 (zebrafish) hypothalamus baseline adult, male, female, untreatment Microglia (cluster: 11)
    Macrophages (cluster: 7)
    potential marker
    potential marker
    NA
    NA
    GSE150498 (wildtype, 1X DSS) intestine disease 6dpf, wildtype, 1X DSS Proliferative myeloid + ILC (cluster: 8)
    potential marker
    NA
    GSE137784 (HCC, HepABC) liver disease 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC Immune cells (cluster: 7)
    potential marker
    NA
    GSE137784 (HCC, CreLox) liver disease 6mpf, male, isolated from the zebrafish without HCC Immune cells (cluster: 4)
    potential marker
    NA
    GSE137784 (no HCC) liver baseline 6mpf, male, isolated from the CreLox zebrafish with HCC Immune cells (cluster: 9)
    potential marker
    NA
    PRJNA668529 (3d) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 days Lymphocyte cells (cluster: 1)
    Macrophages (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    PRJNA668529 (3h) olfactory rosette disease 3mpf, intranasal 100ng r-Spike 3 hours Lymphocyte cells (cluster: 2)
    Macrophages (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    PRJNA668529 (control) olfactory rosette baseline 3mpf, intranasal PBS Lymphocyte cells (cluster: 2)
    Macrophages (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    PRJNA415636 (primary pancreatic islet) primary pancreatic islet baseline adult, Zebrabow M, primary pancreatic islet Macrophages (cluster: 18)
    potential marker
    NA
    GSE122680 (14dpf) retina baseline 14dpf, WT, untreatment Retinal ganglion cells (cluster: 6)
    Retinal ganglion cells (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    GSE122680 (2dpf) retina baseline 2dpf, WT, untreatment Retinal ganglion cells (cluster: 8)
    Retinal ganglion cells (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    PRJNA551501 (2mpf) thyroid gland baseline 2mpf, Tg(tg:mVenus-T2A-NTR) Non-follicular epithelium (cluster: 5)
    Immune cells (cluster: 9)
    potential marker
    potential marker
    NA
    NA
    PRJNA551501 (8mpf) thyroid gland baseline 8mpf, Tg(tg:mVenus-T2A-NTR) Immune cells (cluster: 10)
    Non-follicular epithelium (cluster: 3)
    Immune cells (cluster: 5)
    potential marker
    potential marker
    potential marker
    NA
    NA
    NA
    GSE131136 (all) trunk, skin baseline 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
    GSE159709 (melanoma) tumor disease adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells Macrophages (cluster: 4)
    potential marker
    NA
    PRJNA641144 (P_INV) tumor disease adult, ZMEL1-INV cells in vivo primary tumors Melanoma cells (cluster: 8)
    potential marker
    NA
    PRJNA641144 (M_INV) tumor disease adult, ZMEL1-INV cells in vivo metastases Melanoma cells (cluster: 7)
    Melanoma cells (cluster: 8)
    potential marker
    potential marker
    NA
    NA
    GSE176129 (pdgfrb-positive) whole body baseline 5dpf, FACS-isolated pdgfrb-positive cells Neutrophils (cluster: 31)
    Macrophages (cluster: 42)
    potential marker
    potential marker
    NA
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 2.5dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 7)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 6dpf, cd41:GFPlow-runx1-/- Epidermal cells (cluster: 4)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 10dpf, cd41:GFPlow-runx1-/- Neutrophils (cluster: 7)
    potential marker
    NA
    GSE158099 (WT) whole body baseline 16dpf, cd41:GFPlow-WT Neutrophils (cluster: 5)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 7)
    potential marker
    NA
    GSE158099 (runx1 -|-) whole body hematopoietic 16dpf, cd41:GFPlow-runx1-/- Macrophages (cluster: 10)
    Neutrophils (cluster: 6)
    potential marker
    potential marker
    NA
    NA
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish