Fish Single-cell RNA Database

CELL TYPE: Proliferative myeloid + ILC

Distribution of Proliferative myeloid + ILC in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000053136	b2m	4: 12785964 ~ 12795489 (-)
ENSDARG00000099518	si:ch211-119e14.1	7: 18606798 ~ 18617187 (-)
ENSDARG00000099026	si:dkey-185m8.2	7: 8324506 ~ 8341388 (+)
ENSDARG00000103276	fcer1g	7: 19033883 ~ 19043401 (-)
ENSDARG00000079387	si:ch211-102c2.4	5: 26824303 ~ 26834707 (-)
ENSDARG00000068233	zgc:64051	5: 26869580 ~ 26879321 (-)
ENSDARG00000055713	fmnl1a	3: 37196258 ~ 37235300 (+)
ENSDARG00000004034	arhgdig	3: 27713610 ~ 27769232 (+)
ENSDARG00000027063	arpc1b	3: 40809011 ~ 40820612 (+)
ENSDARG00000038010	rac2	3: 29510818 ~ 29544039 (+)
ENSDARG00000079808	si:ch73-208g10.1	3: 54502350 ~ 54524194 (-)
ENSDARG00000101169	grap2b	6: 427317 ~ 442276 (-)
ENSDARG00000055186	ccr9a	2: 32796873 ~ 32799083 (+)
ENSDARG00000017653	rgs13	2: 6475567 ~ 6482240 (-)
ENSDARG00000104077	fcer1gl	2: 58077662 ~ 58085444 (-)
ENSDARG00000104300	wipf1a	9: 2499627 ~ 2518359 (+)
ENSDARG00000041959	cxcr4b	9: 10692905 ~ 10694930 (+)
ENSDARG00000023188	lcp1	9: 56251000 ~ 56272465 (-)
ENSDARG00000089043	ptpn6	16: 31720042 ~ 31756963 (-)
ENSDARG00000041923	ccl38.6	20: 38257766 ~ 38291952 (+)
ENSDARG00000041835	ccl38a.5	20: 38279523 ~ 38280392 (+)
ENSDARG00000026350	wasb	8: 23560183 ~ 23578660 (-)
ENSDARG00000069482	traf1	8: 12408840 ~ 12432685 (-)
ENSDARG00000015149	wasa	8: 25629722 ~ 25643932 (+)
ENSDARG00000044129	si:ch211-214p16.1	17: 25585487 ~ 25586858 (-)
ENSDARG00000098293	si:dkey-27i16.2	14: 14560932 ~ 14566417 (-)
ENSDARG00000076189	ccdc88b	14: 45702521 ~ 45772506 (+)
ENSDARG00000030938	fermt3b	14: 45970033 ~ 45997630 (+)
ENSDARG00000077069	srgn	13: 23070581 ~ 23074454 (-)
ENSDARG00000052826	runx3	13: 45092766 ~ 45225980 (-)
ENSDARG00000104325	plek	13: 1070705 ~ 1085973 (-)
ENSDARG00000090767	si:ch211-136m16.8	12: 3981346 ~ 3992839 (-)
ENSDARG00000078249	unc13d	12: 36474565 ~ 36521947 (-)
ENSDARG00000098946	pald1a	12: 48094278 ~ 48199227 (-)
ENSDARG00000071251	ppp1r18	19: 823945 ~ 840530 (+)
ENSDARG00000075592	tnfaip8l2a	19: 373811 ~ 379750 (-)
ENSDARG00000011334	ncaldb	19: 12297100 ~ 12324514 (-)
ENSDARG00000089838	si:dkey-262k9.4	15: 36506014 ~ 36533437 (-)
ENSDARG00000088091	pfn1	23: 44580254 ~ 44605765 (+)
ENSDARG00000036785	si:ch211-226m16.2	23: 33337734 ~ 33350990 (-)
ENSDARG00000099874	agap2	23: 36675207 ~ 36724575 (-)
ENSDARG00000055955	lcp2a	21: 30306369 ~ 30347592 (+)
ENSDARG00000053624	csf1rb	21: 43854594 ~ 43877428 (+)
ENSDARG00000036628	cd74b	21: 33459524 ~ 33463894 (+)
ENSDARG00000059774	dub	21: 22917221 ~ 22951646 (-)
ENSDARG00000008186	syk	10: 5533843 ~ 5581487 (-)
ENSDARG00000098700	il1b	10: 44955106 ~ 44964776 (+)
ENSDARG00000099690	vaspa	10: 323401 ~ 342564 (-)
ENSDARG00000071437	ptprc	22: 22977268 ~ 23067859 (-)
ENSDARG00000067711	parvg	25: 5068442 ~ 5084539 (+)
--	hmha1b	--
--	loc100151196	--
--	loc100535806	--
--	loc101884267	--
--	tagapb	--
--	im:7154036	--
--	gmfg	--
--	loc100151049	--
--	loc100537803	--
--	loc101884175	--
--	loc103908724	--
--	loc110439470	--
--	si:ch73-203a8.1	--
--	srgn.1	--
--	zgc:172352	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Proliferative myeloid + ILC.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE150498 (wildtype, untreated)	Danio rerio	intestine	9	Proliferative myeloid + ILC	baseline	6dpf, wildtype, untreated	ENSDARG00000026350 (wasb)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (nod2-\|-, untreated)	Danio rerio	intestine	5	Proliferative myeloid + ILC	disease	6dpf, nod2-/-, untreated	ENSDARG00000026350 (wasb)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (wildtype, 1X DSS)	Danio rerio	intestine	8	Proliferative myeloid + ILC	disease	6dpf, wildtype, 1X DSS	ENSDARG00000026350 (wasb)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (nod2-\|-, 1X DSS)	Danio rerio	intestine	6	Proliferative myeloid + ILC	disease	6dpf, nod2-/-, 1X DSS	ENSDARG00000026350 (wasb)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (wildtype, 2X DSS)	Danio rerio	intestine	5	Proliferative myeloid + ILC	disease	6dpf, wildtype, 2X DSS	ENSDARG00000026350 (wasb)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (wildtype, 2X DSS+BZA)	Danio rerio	intestine	6	Proliferative myeloid + ILC	disease	6dpf, wildtype, 2X DSS+BZA	ENSDARG00000026350 (wasb)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (nod2-\|-, 2X DSS)	Danio rerio	intestine	5	Proliferative myeloid + ILC	disease	6dpf, nod2-/-, 2X DSS	ENSDARG00000026350 (wasb)	marker	DOI:10.1038/s41586-021-03484-5
GSE150498 (nod2-\|-, 2X DSS+BZA)	Danio rerio	intestine	6	Proliferative myeloid + ILC	disease	6dpf, nod2-/-, 2X DSS+BZA	ENSDARG00000026350 (wasb)	marker	DOI:10.1038/s41586-021-03484-5

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Proliferative myeloid + ILC

Distribution of Proliferative myeloid + ILC in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

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