GENE ID: ENSDARG00000088091

Symbol Location Gene type Genome version Species
pfn1 23: 44580254 ~ 44605765 (+) protein_coding GRCz11 Danio rerio

  • PPI (protein-protein interaction) results are shown above.
  • Green is ENSDARG00000088091 (pfn1), yellow represents other genes.
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    • MARKER



    EXPRESSION

    Dataset ID Tissue / Organ Experiment type Sample Cell type Marker class Evidence
    PRJNA554650 (6.5dpf) brain baseline 6.5dpf, whole brain of nr1d1:VNP fish Microglia (cluster: 18)
    Cranial ganglion (cluster: 22)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA415636 (brain) brain baseline adult, Zebrabow M, brain Microglia (cluster: 4)
    Lymphocyte cells (cluster: 6)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (8dpf) brain, eye baseline 8dpf, untreatment Microglia (cluster: 13)
    		 potential marker
    		 NA
    GSE158142 (15dpf) brain, eye baseline 15dpf, untreatment Blood,immune cell (cluster: 11)
    Blood,immune cell (cluster: 15)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA610520 (3.5dpf) caudal hematopoietic tissue baseline 3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 11)
    Myeloid cells (cluster: 6)
    Myeloid cells (cluster: 8)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA610520 (4.5dpf) caudal hematopoietic tissue baseline 4.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells. Endothelium (cluster: 11)
    Myeloid cells (cluster: 4)
    Monocytes (cluster: 6)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE144944 (fgfr3 -|-) cranial vault growth 1mpf, fgfr3 -/- Immune cells (cluster: 11)
    Immune cells (cluster: 4)
    Epidermal cells (cluster: 5)
    Epidermal cells (cluster: 8)
    		 potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    GSE144944 (fgfr3 +|+) cranial vault baseline 1mpf, fgfr3 +/+ Immune cells (cluster: 4)
    Immune cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE130526 (fin) dorsal and anal fin baseline adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry Xanthophores (cluster: 4)
    Immune cells (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (WT, ezh1+|+) embryo baseline 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 5)
    Macrophages (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE173972 (HET, ezh1+|-) embryo hematopoietic 1.25dpf, Kdrl-positive embryos Neutrophils (cluster: 6)
    		 potential marker
    		 NA
    GSE158849 (labeled) embryo baseline 6hpf, WT, 4sUTP injected (labeled) Enveloping layer cells (cluster: 7)
    		 potential marker
    		 NA
    GSE106587 (WT) embryo baseline 12hpf, 6 somites, wild-type TLAB embryo Epidermal cells (cluster: 4)
    		 potential marker
    		 NA
    GSE106587 (MZoep mutant) embryo baseline 12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo EVL, Periderm (cluster: 3)
    Epidermal cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE126647 (control) embryo baseline 1.17dpf, control nkx2.5:ZsYellow+ cells SHFP (cluster: 10)
    		 potential marker
    		 NA
    GSE126647 (Pbx4-depleted) embryo growth 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells Endothelium (cluster: 6)
    		 potential marker
    		 NA
    GSE168695 (5dpf) embryo baseline 5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos Skin (cluster: 10)
    Skin (cluster: 2)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA640816 (2dpf) embryo baseline 2dpf, FACS isolated -4.9sox10:EGFP+ cells Pigment cells (cluster: 7)
    		 potential marker
    		 NA
    PRJNA640816 (2.9dpf) embryo baseline 2.9dpf, FACS isolated -4.9sox10:EGFP+ cells Pigment cells (cluster: 5)
    		 potential marker
    		 NA
    PRJNA706197 (18hpf) embryo baseline 18hpf, FACS sorted sox10:nEOS cells Endothelium (cluster: 3)
    		 potential marker
    		 NA
    PRJNA564810 (5dpf) embryo baseline 5dpf, a single-cell transcriptome atlas for zebrafish development Multipotent cells (cluster: 14)
    Epidermal cells (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA564810 (2dpf) embryo baseline 2dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 15)
    Epidermal cells (cluster: 16)
    Monocytes (cluster: 24)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA564810 (1dpf) embryo baseline 1dpf, a single-cell transcriptome atlas for zebrafish development Epidermal cells (cluster: 12)
    Epidermal cells (cluster: 14)
    Epidermal cells (cluster: 22)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE161712 (M. marinum) granulomas disease adult, infected with bacteria of M. marinum Epithelialized macrophages (cluster: 12)
    Epithelialized macrophages (cluster: 3)
    Monocytes (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158142 (12hpf) head baseline 12hpf, 6 somites, untreatment Epidermal cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158142 (14hpf) head baseline 14hpf, 10 somites, untreatment Epidermal cells (cluster: 6)
    Epidermal cells (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (16hpf) head baseline 16hpf, 14 somites, untreatment Epidermal cells (cluster: 12)
    Placode (cluster: 5)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (18hpf) head baseline 18hpf, 18 somites, untreatment Epidermal cells (cluster: 11)
    Epidermal cells (cluster: 12)
    Placode (cluster: 4)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    GSE158142 (20hpf) head baseline 20hpf, 21-22 somites, untreatment Epidermal cells (cluster: 3)
    Epidermal cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (24hpf) head baseline 24hpf, untreatment Epidermal cells (cluster: 5)
    Epidermal cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    GSE158142 (1.5dpf) head baseline 1.5dpf, untreatment Epidermal cells (cluster: 10)
    		 potential marker
    		 NA
    GSE158142 (2dpf) head baseline 2dpf, untreatment Epidermal cells (cluster: 5)
    		 potential marker
    		 NA
    GSE158142 (3dpf) head baseline 3dpf, untreatment Epidermal cells (cluster: 4)
    		 potential marker
    		 NA
    PRJNA608912 (wt_unjuried) heart baseline 5mpf, wild type, uninjured Macrophages (cluster: 6)
    Immune cells (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (wt_2dpi) heart regeneration 5mpf, wild type, 2 days post injury Neutrophils (cluster: 10)
    Macrophages (cluster: 2)
    Coronary endothelial cells (cluster: 5)
    Macrophages (cluster: 6)
    Macrophages (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    NA
    PRJNA608912 (wt_7dpi) heart regeneration 5mpf, wild type, 7 days post injury Macrophages (cluster: 1)
    Immune cells (cluster: 8)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (wt_14dpi) heart regeneration 5mpf, wild type, 14 days post injury Macrophages (cluster: 6)
    Immune cells (cluster: 7)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (kit_uninjuried) heart regeneration 5mpf, kit mutant, uninjured Immune cells (cluster: 12)
    Macrophages (cluster: 5)
    Macrophages (cluster: 7)
    Neutrophils (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    NA
    PRJNA608912 (kit_2dpi) heart regeneration 5mpf, kit mutant, 2 days post injury Macrophages (cluster: 2)
    Macrophages (cluster: 5)
    Macrophages (cluster: 9)
    		 potential marker
    potential marker
    potential marker
    		 NA
    NA
    NA
    PRJNA608912 (kit_7dpi) heart regeneration 5mpf, kit mutant, 7 days post injury Macrophages (cluster: 2)
    Immune cells (cluster: 9)
    		 potential marker
    potential marker
    		 NA
    NA
    PRJNA608912 (kit_14dpi) heart regeneration 5mpf, kit mutant, 14 days post injury Macrophages (cluster: 6)
    Immune cells (cluster: 9)