Fish Single-cell RNA Database

GENE ID: ENSDARG00000079497

Symbol	Location	Gene type	Genome version	Species
tcima	5: 27866649 ~ 27867657 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000079497 (tcima), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000079497	tcima	5: 27866649 ~ 27867657 (-)
ENSDARG00000026972	si:ch211-119o8.6	2: 38985489 ~ 38992313 (-)
ENSDARG00000101367	si:ch73-193i22.1	9: 46692166 ~ 46701326 (-)
ENSDARG00000043179	bag4	8: 44599405 ~ 44611357 (-)
ENSDARG00000043177	lsm1	8: 44613135 ~ 44618213 (+)
ENSDARG00000013926	slc16a9a	17: 20653773 ~ 20666616 (-)
ENSDARG00000099871	myo7aa	18: 3367779 ~ 3473081 (-)
ENSDARG00000077409	cby1	12: 19188542 ~ 19191679 (+)
ENSDARG00000088641	grn2	19: 40196462 ~ 40199098 (-)
ENSDARG00000089362	grn1	19: 40186677 ~ 40192249 (-)
ENSDARG00000012745	poc1bl	19: 34169055 ~ 34218156 (+)
ENSDARG00000093668	ankmy2b	19: 31043002 ~ 31054326 (+)
ENSDARG00000061835	zpld1a	10: 29112756 ~ 29120535 (-)
ENSDARG00000003157	nfkbil1	10: 8034688 ~ 8041948 (-)
ENSDARG00000087303	cebpd	24: 35564668 ~ 35565927 (+)
ENSDARG00000012355	galnt8a.1	25: 16708584 ~ 16742636 (-)

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	Microglia (cluster: 18)	potential marker	NA
	PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	Microglia (cluster: 4)	potential marker	NA
	PRJNA610520 (3.5dpf)	caudal hematopoietic tissue	baseline	3.5dpf, the mixture of same amount of kdrl:mCherry+ cells, CD41:GFP+ cells and double negative cells.	Epithelial cells (cluster: 12) Epidermal cells (cluster: 9)	potential marker potential marker	NA NA
	GSE144944 (fgfr3 -\|-)	cranial vault	growth	1mpf, fgfr3 -/-	Epidermal cells (cluster: 5) Epidermal cells (cluster: 8)	potential marker potential marker	NA NA
	GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos	Macrophages (cluster: 7)	potential marker