Fish Single-cell RNA Database

CELL TYPE: Non-axial mesoderm cells

Distribution of Non-axial mesoderm cells in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000070546	msgn1	4: 306036 ~ 308006 (+)
ENSDARG00000017078	mespaa	7: 15308042 ~ 15333427 (+)
ENSDARG00000053493	aldh1a2	7: 30326184 ~ 30367650 (-)
ENSDARG00000059680	fscn1a	3: 40576447 ~ 40589489 (+)
ENSDARG00000070404	inka1b	6: 53041180 ~ 53048291 (-)
ENSDARG00000055900	zswim5	2: 27491066 ~ 27543942 (+)
ENSDARG00000019335	hes6	2: 48288461 ~ 48304696 (+)
ENSDARG00000039070	im:7138239	2: 53501750 ~ 53525896 (-)
ENSDARG00000015554	zic2a	9: 31282161 ~ 31287010 (+)
ENSDARG00000020164	efnb2a	9: 26103814 ~ 26127305 (+)
ENSDARG00000060004	fzd7a	9: 13352308 ~ 13355071 (-)
ENSDARG00000006467	pcdh8	9: 53654866 ~ 53666031 (-)
ENSDARG00000092170	apoc1	16: 23972126 ~ 23973721 (+)
ENSDARG00000069252	mixl1	20: 43715157 ~ 43723860 (-)
ENSDARG00000019920	lft1	20: 35073981 ~ 35076387 (-)
ENSDARG00000007329	tbx16	8: 51733907 ~ 51753604 (-)
ENSDARG00000034610	insb	14: 28563081 ~ 28568152 (-)
ENSDARG00000095283	si:dkeyp-2e4.3	13: 44827514 ~ 44843819 (-)
ENSDARG00000007795	cst3	13: 33675556 ~ 33683913 (-)
ENSDARG00000076895	flrt3	13: 33811842 ~ 33822550 (-)
ENSDARG00000037116	cxcl12a	13: 30804367 ~ 30819715 (+)
ENSDARG00000045219	dkk1b	12: 6465557 ~ 6467675 (+)
ENSDARG00000101576	tbxta	19: 14187540 ~ 14191592 (-)
ENSDARG00000018968	acvr1ba	23: 27800519 ~ 27822920 (-)
ENSDARG00000017821	gata5	23: 7379728 ~ 7391028 (+)
ENSDARG00000110967	FP102169.1	23: 6754910 ~ 6765653 (-)
ENSDARG00000056995	snai1a	11: 25251495 ~ 25257595 (-)
ENSDARG00000068761	mespab	25: 11015417 ~ 11016675 (-)
--	si:dkey-261j4.4	--
--	si:dkey-261j4.5	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Non-axial mesoderm cells.

Detail Marker Information in Datasets

Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
GSE158849 (labeled)	Danio rerio	embryo	4	Non-axial mesoderm cells	baseline	6hpf, WT, 4sUTP injected (labeled)	ENSDARG00000068761 (mespab)	marker	DOI:10.1038/s41467-021-23834-1
GSE158849 (labeled)	Danio rerio	embryo	4	Non-axial mesoderm cells	baseline	6hpf, WT, 4sUTP injected (labeled)	ENSDARG00000070546 (msgn1)	marker	DOI:10.1038/s41467-021-23834-1
GSE158849 (labeled)	Danio rerio	embryo	4	Non-axial mesoderm cells	baseline	6hpf, WT, 4sUTP injected (labeled)	ENSDARG00000017078 (mespaa)	marker	DOI:10.1038/s41467-021-23834-1
GSE158849 (labeled)	Danio rerio	embryo	4	Non-axial mesoderm cells	baseline	6hpf, WT, 4sUTP injected (labeled)	ENSDARG00000034610 (insb)	marker	DOI:10.1038/s41467-021-23834-1

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Non-axial mesoderm cells

Distribution of Non-axial mesoderm cells in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences