Fish Single-cell RNA Database

CELL TYPE: Optic cup

Distribution of Optic cup in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Optic cup.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE106587 (WT)	Danio rerio	embryo	5	Optic cup	baseline	12hpf, 6 somites, wild-type TLAB embryo	ENSDARG00000052893 (rx3)	marker	DOI:10.1126/science.aar3131
	GSE106587 (WT)	Danio rerio	embryo	5	Optic cup	baseline	12hpf, 6 somites, wild-type TLAB embryo	ENSDARG00000040321 (rx2)	marker	DOI:10.1126/science.aar3131
	GSE106587 (WT)	Danio rerio	embryo	16	Optic cup	baseline	12hpf, 6 somites, wild-type TLAB embryo	ENSDARG00000052893 (rx3)	marker	DOI:10.1126/science.aar3131
	GSE106587 (MZoep mutant)	Danio rerio	embryo	4	Optic cup	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	ENSDARG00000052893 (rx3)	marker	DOI:10.1126/science.aar3131
	GSE106587 (MZoep mutant)	Danio rerio	embryo	7	Optic cup	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	ENSDARG00000052893 (rx3)	marker	DOI:10.1126/science.aar3131

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.