Fish Single-cell RNA Database

CELL TYPE: Ph arch mesench cells

Distribution of Ph arch mesench cells in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000103713	cd248a	7: 18364176 ~ 18367267 (+)
ENSDARG00000090444	ponzr1	7: 20344032 ~ 20369869 (+)
ENSDARG00000011201	rplp2l	7: 12959846 ~ 12968701 (-)
ENSDARG00000059751	abtb2a	7: 49272702 ~ 49320952 (+)
ENSDARG00000103515	vcana	5: 46424437 ~ 46486028 (+)
ENSDARG00000089769	hapln1a	5: 46490622 ~ 46505702 (-)
ENSDARG00000018958	nrarpb	5: 66025336 ~ 66028729 (-)
ENSDARG00000067984	gas1b	5: 32360336 ~ 32363372 (-)
ENSDARG00000076404	mctp1a	5: 50442112 ~ 50748081 (-)
ENSDARG00000022531	ntn1b	3: 25708549 ~ 25814097 (-)
ENSDARG00000011956	dlx4a	3: 34670076 ~ 34681421 (+)
ENSDARG00000052139	notch3	3: 53526025 ~ 53559581 (-)
ENSDARG00000070047	rgs4	6: 35362225 ~ 35366944 (+)
ENSDARG00000002644	rgs5a	6: 35387367 ~ 35439406 (-)
ENSDARG00000092920	si:ch211-106h4.12	2: 31665836 ~ 31669111 (+)
ENSDARG00000074815	mxra5a	1: 33322174 ~ 33334732 (+)
ENSDARG00000077817	cxxc4	1: 26250729 ~ 26294995 (-)
ENSDARG00000007941	hmx4	1: 40909750 ~ 40911332 (-)
ENSDARG00000089805	pcdh18a	1: 13260809 ~ 13271569 (-)
ENSDARG00000025891	shox	9: 34641237 ~ 34647695 (+)
ENSDARG00000056087	ecrg4a	9: 6371919 ~ 6380653 (-)
ENSDARG00000024694	myo1b	9: 16127209 ~ 16239130 (-)
ENSDARG00000062338	zeb2a	9: 25568839 ~ 25837749 (+)
ENSDARG00000036558	col18a1a	9: 41821613 ~ 41979505 (+)
ENSDARG00000076309	mxra5b	9: 55455801 ~ 55554734 (+)
ENSDARG00000013125	dlx1a	9: 3388099 ~ 3390109 (+)
ENSDARG00000079752	col6a4a	16: 36650984 ~ 36719705 (+)
ENSDARG00000021172	cyp2ad2	20: 25534669 ~ 25542183 (-)
ENSDARG00000027933	glis1b	8: 18044257 ~ 18165677 (+)
ENSDARG00000010294	fmodb	8: 37489495 ~ 37495786 (+)
ENSDARG00000076767	pgfb	17: 44697604 ~ 44752439 (+)
ENSDARG00000054823	id3	17: 27271399 ~ 27273296 (-)
ENSDARG00000070670	crip2	17: 37445525 ~ 37474689 (-)
ENSDARG00000088255	smoc1	17: 48314724 ~ 48368231 (+)
ENSDARG00000117253	BX088707.3	14: 38715673 ~ 38744637 (+)
ENSDARG00000008372	spred2b	13: 5870644 ~ 5937034 (-)
ENSDARG00000031981	pcbd1	13: 25720969 ~ 25726534 (+)
ENSDARG00000089519	fbln7	13: 47750933 ~ 47800342 (-)
ENSDARG00000069630	tat	18: 13162728 ~ 13179510 (+)
ENSDARG00000014626	dlx3b	12: 5708400 ~ 5711920 (+)
ENSDARG00000071560	dlx4b	12: 5719616 ~ 5728755 (-)
ENSDARG00000103092	grem2b	12: 47543832 ~ 47558276 (-)
ENSDARG00000061259	sost	12: 27331324 ~ 27335652 (+)
ENSDARG00000042296	dlx5a	19: 41470216 ~ 41472228 (-)
ENSDARG00000006120	tbx2b	15: 27364394 ~ 27371340 (+)
ENSDARG00000077881	chl1a	23: 11285662 ~ 11452312 (+)
ENSDARG00000089078	si:ch211-160j14.3	21: 32089491 ~ 32119965 (-)
ENSDARG00000056619	arhgap42a	21: 22738939 ~ 22796064 (+)
ENSDARG00000007912	si:ch211-196i2.1	21: 14253404 ~ 14310159 (-)
ENSDARG00000059327	gata2a	11: 3847442 ~ 3865472 (-)
ENSDARG00000054562	her15.1	11: 41981959 ~ 41984487 (+)
ENSDARG00000079889	phldb2a	10: 35468978 ~ 35528389 (+)
ENSDARG00000009401	vcanb	10: 43188678 ~ 43263885 (+)
ENSDARG00000099124	f3a	24: 31277360 ~ 31290706 (+)
ENSDARG00000071626	ptgdsb.2	24: 17021513 ~ 17023392 (-)
ENSDARG00000044132	ogna	22: 10454603 ~ 10459880 (-)
ENSDARG00000059367	mfap2	22: 22888 ~ 24275 (+)
ENSDARG00000086391	cald1b	25: 20140926 ~ 20211831 (+)
--	ebf1a	--
--	fam129ba	--
--	si:ch211-39i22.1	--
--	zgc:162939	--
--	loc103909969	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Ph arch mesench cells.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE176129 (pdgfrb-positive)	Danio rerio	whole body	15	Ph arch mesench cells	baseline	5dpf, FACS-isolated pdgfrb-positive cells	ENSDARG00000011956 (dlx4a)	marker	DOI:10.7554/eLife.44431
	GSE176129 (pdgfrb-positive)	Danio rerio	whole body	34	Ph arch mesench cells	baseline	5dpf, FACS-isolated pdgfrb-positive cells	ENSDARG00000011956 (dlx4a)	marker	DOI:10.7554/eLife.44431

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Ph arch mesench cells

Distribution of Ph arch mesench cells in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences