Fish Single-cell RNA Database

CELL TYPE: Tailbud

Distribution of Tailbud in Tissues/Organs

The figure shows the distribution of cell number of each tissue in different species.
Click on the tissue on the x-axis to browse the detailed information of the tissue.
Click on the species on legend to browse the detailed information of the species.

Word Cloud of All Markers

Function

Gene ID	Symbol	Location
ENSDARG00000102464	wnt5b	4: 8532580 ~ 8663117 (+)
ENSDARG00000018111	kdm7aa	4: 22484830 ~ 22519525 (-)
ENSDARG00000070546	msgn1	4: 306036 ~ 308006 (+)
ENSDARG00000045694	prickle1b	4: 13963499 ~ 13995766 (-)
ENSDARG00000006754	mllt3	7: 18779555 ~ 18881358 (-)
ENSDARG00000036096	smad3a	7: 34102661 ~ 34149263 (-)
ENSDARG00000014722	her1	5: 68788658 ~ 68795063 (-)
ENSDARG00000017917	her7	5: 68807170 ~ 68808485 (+)
ENSDARG00000041065	hspb1	5: 3568016 ~ 3584815 (-)
ENSDARG00000058128	msna	5: 22133153 ~ 22174037 (+)
ENSDARG00000035563	znf703	5: 24329983 ~ 24333684 (-)
ENSDARG00000059596	clip2	5: 59392183 ~ 59480161 (+)
ENSDARG00000056012	eve1	3: 23641935 ~ 23643830 (-)
ENSDARG00000011579	hoxb10a	3: 23669267 ~ 23671863 (+)
ENSDARG00000056023	hoxb9a	3: 23677351 ~ 23682436 (+)
ENSDARG00000056030	hoxb7a	3: 23691847 ~ 23696208 (+)
ENSDARG00000032619	tob1a	3: 18185616 ~ 18189283 (-)
ENSDARG00000009534	wls	2: 10342177 ~ 10386738 (-)
ENSDARG00000038754	plk3	2: 35603637 ~ 35611789 (+)
ENSDARG00000039650	itm2cb	2: 48284464 ~ 48298985 (-)
ENSDARG00000019335	hes6	2: 48288461 ~ 48304696 (+)
ENSDARG00000006526	fn1b	1: 5504128 ~ 5543065 (-)
ENSDARG00000059280	hoxd3a	9: 1937049 ~ 1959917 (-)
ENSDARG00000059274	hoxd9a	9: 1964005 ~ 1965727 (-)
ENSDARG00000057859	hoxd10a	9: 1967707 ~ 1970071 (-)
ENSDARG00000059263	hoxd12a	9: 1981882 ~ 1986014 (-)
ENSDARG00000059267	hoxd11a	9: 1975818 ~ 1978090 (-)
ENSDARG00000007099	cx43.4	9: 46405587 ~ 46415847 (-)
ENSDARG00000018787	efna1b	16: 23282655 ~ 23298149 (+)
ENSDARG00000007009	hoxa11b	16: 20904754 ~ 20907378 (+)
ENSDARG00000031337	hoxa10b	16: 20910186 ~ 20913003 (+)
ENSDARG00000036254	hoxa13b	16: 20895904 ~ 20897836 (+)
ENSDARG00000056819	hoxa9b	16: 20915319 ~ 20917584 (+)
ENSDARG00000092170	apoc1	16: 23972126 ~ 23973721 (+)
ENSDARG00000068213	fzd10	8: 44295983 ~ 44298964 (-)
ENSDARG00000004757	ybx1	8: 47143829 ~ 47152086 (-)
ENSDARG00000007329	tbx16	8: 51733907 ~ 51753604 (-)
ENSDARG00000033184	prkar2aa	8: 26329482 ~ 26369115 (+)
ENSDARG00000042485	foxd5	8: 30452945 ~ 30454096 (+)
ENSDARG00000004861	esrrga	17: 29797876 ~ 29902187 (-)
ENSDARG00000015016	kif26ab	17: 45815353 ~ 45989466 (+)
ENSDARG00000070794	greb1	17: 30369107 ~ 30418016 (+)
ENSDARG00000075707	nid2a	17: 14796926 ~ 14876758 (-)
ENSDARG00000013409	bmp2a	17: 4227254 ~ 4231532 (-)
ENSDARG00000019995	bmp4	17: 50564070 ~ 50586135 (+)
ENSDARG00000036292	cdx4	14: 32961718 ~ 32965169 (-)
ENSDARG00000003399	fgf8a	13: 28495419 ~ 28501985 (+)
ENSDARG00000056986	dact2	13: 43400443 ~ 43407199 (+)
ENSDARG00000020219	dld	13: 6075572 ~ 6081803 (-)
ENSDARG00000099761	vox	13: 50621840 ~ 50624743 (-)
ENSDARG00000100483	vent	13: 50607664 ~ 50614639 (-)
ENSDARG00000033999	cyp26a1	12: 8954761 ~ 8958353 (-)
ENSDARG00000056783	raraa	12: 10952794 ~ 11157237 (+)
ENSDARG00000055381	bambia	12: 23424108 ~ 23430356 (+)
ENSDARG00000054208	phkg2	12: 28888975 ~ 28901184 (+)
ENSDARG00000026513	hoxb6b	12: 27127139 ~ 27128768 (+)
ENSDARG00000054033	hoxb1b	12: 27141140 ~ 27142834 (+)
ENSDARG00000045074	arl4d	12: 27243059 ~ 27245757 (+)
ENSDARG00000105013	hoxa9a	19: 19747430 ~ 19752145 (+)
ENSDARG00000040815	tsku	15: 29343280 ~ 29354020 (-)
ENSDARG00000019949	serpinh1b	15: 29382454 ~ 29388012 (-)
ENSDARG00000002336	dlc	15: 20463448 ~ 20468302 (-)
ENSDARG00000031098	timm50	15: 20475694 ~ 20528494 (-)
ENSDARG00000032963	her12	23: 21444922 ~ 21446985 (-)
ENSDARG00000077341	ppp1r14c	23: 39807857 ~ 39849155 (-)
ENSDARG00000058818	rbm38	23: 6586467 ~ 6632106 (+)
ENSDARG00000056695	phc2a	23: 22063484 ~ 22130778 (-)
ENSDARG00000034117	rarga	23: 35847200 ~ 35963735 (+)
ENSDARG00000070339	hoxc3a	23: 36087219 ~ 36149371 (+)
ENSDARG00000070348	hoxc10a	23: 35969228 ~ 36086895 (+)
ENSDARG00000070346	hoxc8a	23: 36101185 ~ 36103635 (+)
ENSDARG00000070343	hoxc6a	23: 36115541 ~ 36116907 (+)
ENSDARG00000092809	hoxc9a	23: 36095260 ~ 36097488 (+)
ENSDARG00000115868	sp5l	23: 28023091 ~ 28025943 (-)
ENSDARG00000044485	sall4	23: 38940700 ~ 38952596 (+)
ENSDARG00000103554	notch1a	21: 4766244 ~ 4849056 (-)
ENSDARG00000016858	smad7	21: 3419459 ~ 3452683 (-)
ENSDARG00000026236	zgc:56585	21: 34835811 ~ 34844316 (-)
ENSDARG00000068732	spry4	21: 44684577 ~ 44691068 (+)
ENSDARG00000101023	msx2b	21: 41144914 ~ 41147818 (-)
ENSDARG00000044803	dhrs3b	11: 28590733 ~ 28614608 (-)
ENSDARG00000056995	snai1a	11: 25251495 ~ 25257595 (-)
ENSDARG00000098359	il17rd	11: 42641404 ~ 42722658 (+)
ENSDARG00000101954	hoxc6b	11: 2198831 ~ 2204754 (+)
ENSDARG00000036670	aplnrb	10: 8629275 ~ 8631361 (+)
ENSDARG00000091419	nrarpa	10: 10860759 ~ 10864331 (-)
ENSDARG00000099840	lpar1	10: 13000370 ~ 13064110 (+)
ENSDARG00000058394	tagln3b	24: 21917012 ~ 21934571 (-)
ENSDARG00000011863	ptk7a	22: 38394502 ~ 38459454 (-)
ENSDARG00000104034	arid3b	25: 28987957 ~ 29074064 (-)
ENSDARG00000099637	szl	25: 371164 ~ 375882 (-)
--	ac024175.4	--
--	depdc7	--
--	fam212ab	--
--	hoxc10a.1	--
--	sdc3	--
--	sepn1	--
--	si:dkey-81p22.14	--
--	zgc:162939	--
--	si:ch211-101l18.8	--
--	si:dkey-11c5.14	--
--	ta	--
--	tbx6l	--
--	slc25a5.1	--

The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes of Tailbud.

Detail Marker Information in Datasets

	Dataset ID	Species	Tissue / Organ	Cell cluster	Cell type	Experiment type	Sample	Marker gene	Marker class	Evidence
	GSE106587 (MZoep mutant)	Danio rerio	embryo	6	Tailbud	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	-- (ta)	marker	DOI:10.1126/science.aar3131
	GSE106587 (MZoep mutant)	Danio rerio	embryo	6	Tailbud	baseline	12hpf, 6 somites, maternal zygotic oep tz57 mutant embryo	ENSDARG00000003399 (fgf8a)	marker	DOI:10.1126/science.aar3131

After clicking the magnifying glass button, the clustering and expression information of this marker gene will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

CELL TYPE: Tailbud

Distribution of Tailbud in Tissues/Organs

Word Cloud of All Markers

Function

Detail Marker Information in Datasets

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences