DATASET ID: GSE137784 (HCC, CreLox)

Basic information

Tissue / Organ liver
Experiment type disease
Sample 6mpf, male, isolated from the zebrafish without HCC
Source dataset ID GSM4087820
Project ID GSE137784
Species Danio rerio

Clustering Result

Function

  • The figures above shows the results of GO/KEGG/PPI of marker/potential marker genes in each cell cluster.
  • The button on the left can be used to select the target cell cluster.

    • Marker Relationship

    Cluster Cell type Gene id (symbol) Gene type Marker class Evidence
    1 Hepatocytes -- (afp4.1) -- marker DOI:10.1242/bio.047829
    2 Hepatocytes ENSDARG00000015866 (apoa2) protein_coding marker DOI:10.1242/bio.047829
    3 Hepatocytes ENSDARG00000038439 (fabp10a) protein_coding marker DOI:10.1242/bio.047829
    4 Immune cells ENSDARG00000026350 (wasb) protein_coding marker DOI:10.1242/bio.047829
    4 Immune cells ENSDARG00000054610 (coro1a) protein_coding marker DOI:10.1242/bio.047829
    5 Hepatocytes ENSDARG00000016771 (tfa) protein_coding marker DOI:10.1242/bio.047829
    6 Endothelium ENSDARG00000037870 (actb2) protein_coding marker DOI:10.1242/bio.047829
    7 Endothelium ENSDARG00000058358 (krt8) protein_coding marker DOI:10.1242/bio.047829
    11 Erythroid cells ENSDARG00000038643 (alas2) protein_coding marker DOI:10.1242/bio.047829
    11 Erythroid cells ENSDARG00000034852 (nt5c2l1) protein_coding marker DOI:10.1242/bio.047829

    Expression


    • The expression of marker genes of each cluster is shown in the figure above.
    • More detailed expression of marker gene can be viewed in the gene details page. (Follow the links in the table above)