Fish Single-cell RNA Database

GENE ID: ENSDARG00000053630

Symbol	Location	Gene type	Genome version	Species
si:dkey-182o15.5	7: 29509255 ~ 29515727 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000053630 (si:dkey-182o15.5), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000053630	si:dkey-182o15.5	7: 29509255 ~ 29515727 (+)
ENSDARG00000092352	jac4	7: 8456999 ~ 8458462 (+)
ENSDARG00000056166	jac2	7: 8598995 ~ 8602864 (-)
ENSDARG00000056773	zgc:163079	3: 19557604 ~ 19561058 (-)
ENSDARG00000088711	lgals1l1	3: 28939759 ~ 28946756 (+)
ENSDARG00000033382	grifin	3: 41784542 ~ 41795917 (-)
ENSDARG00000090900	apnl	3: 31249885 ~ 31254979 (-)
ENSDARG00000060655	BX005421.2	3: 3992590 ~ 4007814 (+)
ENSDARG00000038153	lgals2b	6: 603278 ~ 609887 (-)
ENSDARG00000068220	mbl2	2: 37887277 ~ 37889152 (-)
ENSDARG00000092920	si:ch211-106h4.12	2: 31665836 ~ 31669111 (+)
ENSDARG00000114182	mkxb	2: 3986083 ~ 4009200 (+)
ENSDARG00000038683	NA	1: 59075795 ~ 59104145 (-)
ENSDARG00000033684	oxgr1a.1	1: 2048047 ~ 2051599 (-)
ENSDARG00000093347	si:ch211-239f4.6	1: 45138905 ~ 45146834 (-)
ENSDARG00000079043	si:dkeyp-75b4.10	1: 9994811 ~ 10000376 (+)
ENSDARG00000069566	mucms1	1: 45149844 ~ 45157243 (-)
ENSDARG00000012609	hpxa	9: 32840114 ~ 32847642 (-)
ENSDARG00000058351	tapbpl	16: 9787383 ~ 9802998 (-)
ENSDARG00000051912	hpxb	16: 2394193 ~ 2414063 (-)
ENSDARG00000088989	si:dkey-241l7.5	20: 54018005 ~ 54019284 (+)
ENSDARG00000033227	lect2l	14: 36885524 ~ 36887063 (+)
ENSDARG00000058557	il11b	19: 10429810 ~ 10432134 (-)
ENSDARG00000025903	lgals9l1	15: 31032255 ~ 31043183 (-)
ENSDARG00000089216	zmp:0000001268	21: 42870101 ~ 42876565 (-)
ENSDARG00000024815	ogfrl2	11: 20091255 ~ 20096018 (-)
ENSDARG00000030778	BX323854.1	24: 39990695 ~ 39992254 (+)
ENSDARG00000070478	amn1	25: 28893615 ~ 28903894 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
PRJNA641144 (D_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro individual culture	NA	NA	NA
PRJNA641144 (C_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vitro co-culture	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000053630

EXPRESSION

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