Fish Single-cell RNA Database

GENE ID: ENSDARG00000095410

Symbol	Location	Gene type	Genome version	Species
si:ch211-285c6.4	7: 3375546 ~ 3380757 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000095410 (si:ch211-285c6.4), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
GSE150498 (wildtype, 1X DSS)	intestine	disease	6dpf, wildtype, 1X DSS	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE152982 (wild type)	trunk	baseline	1.25dpf, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.