Fish Single-cell RNA Database

GENE ID: ENSDARG00000038742

Symbol	Location	Gene type	Genome version	Species
rbp1.2	2: 39021282 ~ 39028052 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000038742 (rbp1.2), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000088835	efs	7: 24049776 ~ 24068953 (+)
ENSDARG00000017794	sdr16c5b	7: 58699718 ~ 58718472 (+)
ENSDARG00000011170	ndrg2	7: 3930742 ~ 4036875 (-)
ENSDARG00000021135	dhrs4	7: 24039464 ~ 24047316 (-)
ENSDARG00000028048	rdh8a	3: 53687645 ~ 53722182 (-)
ENSDARG00000016213	zmp:0000001048	3: 53511936 ~ 53522208 (+)
ENSDARG00000038742	rbp1.2	2: 39021282 ~ 39028052 (+)
ENSDARG00000018077	rbp1.1	2: 39028337 ~ 39036604 (-)
ENSDARG00000012369	rdh10b	2: 30182431 ~ 30186307 (+)
ENSDARG00000016233	sdr16c5a	2: 11483072 ~ 11504778 (-)
ENSDARG00000105060	rdh8b	1: 59293873 ~ 59303460 (+)
ENSDARG00000096594	lratb.1	1: 10110203 ~ 10119029 (+)
ENSDARG00000037278	lrata	1: 25696798 ~ 25698039 (+)
ENSDARG00000017882	rdh1	9: 48673093 ~ 48701035 (-)
ENSDARG00000019260	dhrs9	9: 48706038 ~ 48736388 (-)
ENSDARG00000002467	rdh14b	20: 9421448 ~ 9428021 (-)
ENSDARG00000037191	ttr	20: 6142433 ~ 6157942 (+)
ENSDARG00000039299	rdh14a	13: 32454262 ~ 32456842 (+)
ENSDARG00000018069	rdh12	13: 33055548 ~ 33065830 (+)
ENSDARG00000059163	rbp3	12: 2665081 ~ 2670156 (+)
ENSDARG00000101199	rbp4	12: 5115929 ~ 5120339 (-)
ENSDARG00000010764	flj13639	15: 43166511 ~ 43198413 (+)
ENSDARG00000044982	dhrs3a	23: 21663631 ~ 21674679 (+)
ENSDARG00000039974	rai14	21: 19547806 ~ 19608698 (+)
ENSDARG00000044803	dhrs3b	11: 28590733 ~ 28614608 (-)
ENSDARG00000058730	rdh10a	24: 13251480 ~ 13272843 (-)
ENSDARG00000051874	stra6	25: 22571475 ~ 22634675 (+)
--	zgc:109982	--

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	PRJNA564810 (5dpf)	embryo	baseline	5dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
	PRJNA672101 (nrl-KO)	retina	growth	5mpf, three retinas from nrl-KO zebrafsih	NA	NA	NA
	PRJNA672101 (WT)	retina	baseline	5mpf, three retinas from WT zebrafsih	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.