Fish Single-cell RNA Database

GENE ID: ENSDARG00000067814

Symbol	Location	Gene type	Genome version	Species
zmp:0000001127	2: 9621289 ~ 9625548 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000067814 (zmp:0000001127), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000108340	si:ch211-283g2.2	5: 4223515 ~ 4230370 (-)
ENSDARG00000026925	nos2a	5: 43782267 ~ 43796971 (+)
ENSDARG00000052157	il12rb2	6: 34908597 ~ 34925690 (+)
ENSDARG00000053620	ebi3	2: 41936603 ~ 41942666 (-)
ENSDARG00000067814	zmp:0000001127	2: 9621289 ~ 9625548 (-)
ENSDARG00000007359	NA	8: 50953776 ~ 50962889 (+)
ENSDARG00000033727	il12ba	14: 34951202 ~ 34958756 (+)
ENSDARG00000056874	lygl1	14: 20893065 ~ 20898499 (+)
ENSDARG00000071701	zgc:162941	14: 20900989 ~ 20908036 (+)
ENSDARG00000104149	rraga	14: 14027427 ~ 14094406 (+)
ENSDARG00000038878	il12a	15: 1440364 ~ 1448705 (+)
ENSDARG00000031976	nos2b	15: 30323491 ~ 30348677 (+)
ENSDARG00000086173	relb	15: 17100412 ~ 17125217 (+)
ENSDARG00000041060	lgals9l3	15: 31054200 ~ 31067589 (-)
ENSDARG00000059035	porb	15: 1847135 ~ 1885247 (-)
ENSDARG00000054542	il12bb	21: 35289469 ~ 35302253 (+)
ENSDARG00000098700	il1b	10: 44955106 ~ 44964776 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish	NA	NA	NA
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured	NA	NA	NA
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury	NA	NA	NA
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury	NA	NA	NA
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured	NA	NA	NA
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury	NA	NA	NA
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury	NA	NA	NA
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury	NA	NA	NA
GSE150498 (nod2-\|-, untreated)	intestine	disease	6dpf, nod2-/-, untreated	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
GSE122680 (14dpf)	retina	baseline	14dpf, WT, untreatment	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000067814

EXPRESSION

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