Fish Single-cell RNA Database

GENE ID: ENSDARG00000037262

Symbol	Location	Gene type	Genome version	Species
cdkn2a/b	1: 26127818 ~ 26131088 (-)	protein_coding	GRCz11	Danio rerio

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Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000037262 (cdkn2a/b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000035853	cdkn2aip	7: 52949847 ~ 52960714 (+)
ENSDARG00000101637	ccnd1	7: 54668303 ~ 54679595 (-)
ENSDARG00000002216	tbx3a	5: 72316803 ~ 72324371 (-)
ENSDARG00000018025	tbx2a	5: 56504717 ~ 56513825 (-)
ENSDARG00000052731	ankrd31	5: 51001985 ~ 51011386 (+)
ENSDARG00000061509	tbx3b	5: 26913120 ~ 26918762 (+)
ENSDARG00000038243	e4f1	3: 18714143 ~ 18737126 (-)
ENSDARG00000077473	mych	6: 50451337 ~ 50454833 (+)
ENSDARG00000007241	mycb	2: 32016256 ~ 32018371 (+)
ENSDARG00000037262	cdkn2a/b	1: 26127818 ~ 26131088 (-)
ENSDARG00000037261	mtap	1: 26110985 ~ 26127944 (+)
ENSDARG00000076010	twist1b	16: 19732543 ~ 19734149 (+)
ENSDARG00000036987	has2	16: 15369634 ~ 15387459 (-)
ENSDARG00000103464	pggt1b	8: 411977 ~ 419003 (-)
ENSDARG00000069099	tmco1	8: 21104507 ~ 21110246 (-)
ENSDARG00000079233	si:ch211-160f23.5	17: 27243447 ~ 27266053 (-)
ENSDARG00000037675	npm1b	14: 5588029 ~ 5642461 (-)
ENSDARG00000087181	cbx7b	12: 18916285 ~ 18922976 (+)
ENSDARG00000070228	cdk6	19: 40248697 ~ 40328549 (+)
ENSDARG00000030402	twist1a	19: 2229162 ~ 2231188 (-)
ENSDARG00000007943	gabpb2a	19: 7432710 ~ 7441948 (-)
ENSDARG00000070463	e2f3	19: 29274385 ~ 29294457 (-)
ENSDARG00000079378	phldb1b	15: 17948397 ~ 18091157 (-)
ENSDARG00000016782	huwe1	23: 28494189 ~ 28568978 (+)
ENSDARG00000087937	cdk4	11: 135249 ~ 141592 (-)
ENSDARG00000014329	npm1a	10: 22034477 ~ 22045119 (+)
ENSDARG00000045695	myca	24: 10413484 ~ 10416284 (+)
ENSDARG00000103118	cib1	25: 3224085 ~ 3230187 (-)
ENSDARG00000051748	ccnd2a	25: 16973945 ~ 17239079 (-)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE158142 (5dpf)	brain, eye	baseline	5dpf, untreatment	NA	NA	NA
GSE150498 (nod2-\|-, 2X DSS+BZA)	intestine	disease	6dpf, nod2-/-, 2X DSS+BZA	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000037262

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EXPRESSION

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