Fish Single-cell RNA Database

GENE ID: ENSDARG00000094928

Symbol	Location	Gene type	Genome version	Species
si:ch211-53m15.2	16: 41135018 ~ 41136139 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells	Neutrophils (cluster: 7)	potential marker	NA
	GSE130526 (fin)	dorsal and anal fin	baseline	adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry
	GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum
	PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
	PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
	PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
	GSE148591 (6mpf)	pituitary	baseline	6mpf, male, Sox17:CreERT2
	PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
	GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone
	GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT

After clicking the magnifying glass button, the clustering and expression information will be displayed below.