Fish Single-cell RNA Database

GENE ID: ENSDARG00000056210

Symbol	Location	Gene type	Genome version	Species
hspa1b	8: 24968098 ~ 24970790 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000056210 (hspa1b), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000070477	dnajc2	4: 1766333 ~ 1785120 (-)
ENSDARG00000094191	nup37	4: 17327704 ~ 17377658 (+)
ENSDARG00000020953	dnajb6b	7: 40536928 ~ 40578733 (-)
ENSDARG00000004906	stip1	5: 66807179 ~ 66823794 (-)
ENSDARG00000052881	dnajb5	5: 41542436 ~ 41560874 (-)
ENSDARG00000021973	st13	3: 25087605 ~ 25100726 (+)
ENSDARG00000058148	dnajc7	3: 17878124 ~ 17910375 (+)
ENSDARG00000058494	dnaja3a	3: 11926030 ~ 11947672 (+)
ENSDARG00000070611	zgc:152986	6: 40467562 ~ 40470521 (+)
ENSDARG00000091124	rps19bp1	6: 264927 ~ 268818 (+)
ENSDARG00000038978	dnajb4	2: 9552456 ~ 9560307 (+)
ENSDARG00000020895	bag1	2: 30904069 ~ 30908300 (+)
ENSDARG00000004680	dnajb6a	2: 30103131 ~ 30116467 (+)
ENSDARG00000041394	dnajb1b	1: 55745878 ~ 55750208 (-)
ENSDARG00000030972	dnaja1	1: 45002971 ~ 45014434 (+)
ENSDARG00000058644	dnajb2	9: 7621622 ~ 7655301 (-)
ENSDARG00000056210	hspa1b	8: 24968098 ~ 24970790 (-)
ENSDARG00000043179	bag4	8: 44599405 ~ 44611357 (-)
ENSDARG00000017687	dnajc5gb	17: 6490089 ~ 6514962 (-)
ENSDARG00000039363	dnajb12a	13: 30035253 ~ 30046753 (+)
ENSDARG00000035005	bag2	13: 1404924 ~ 1408775 (-)
ENSDARG00000039486	bag3	13: 25486608 ~ 25498661 (+)
ENSDARG00000017316	bag5	13: 15762278 ~ 15799391 (-)
ENSDARG00000010745	dnaja2b	18: 6857071 ~ 6869356 (+)
ENSDARG00000087473	dnajb12b	12: 48346693 ~ 48374828 (-)
ENSDARG00000019874	hsph1	15: 31564137 ~ 31588162 (-)
ENSDARG00000004836	dnajc5ab	23: 17472702 ~ 17509656 (-)
ENSDARG00000037284	ptges3a	23: 27051919 ~ 27059998 (+)
ENSDARG00000004187	zgc:122979	21: 5169154 ~ 5174054 (+)
ENSDARG00000038302	ccar2	10: 2876020 ~ 2898402 (+)
ENSDARG00000043157	dnajb13	10: 36673387 ~ 36682522 (-)
ENSDARG00000058147	dnajc5b	24: 24808955 ~ 24824899 (+)
ENSDARG00000102295	dnaja3b	22: 25931782 ~ 25943267 (+)
ENSDARG00000052072	dnajb9a	25: 20264117 ~ 20268027 (-)
ENSDARG00000051762	CABZ01080568.1	25: 34662358 ~ 34670413 (-)
--	dnaja2	--

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	Pancreas endocrine cells (cluster: 3)	potential marker	NA
PRJNA554650 (6.5dpf)	brain	baseline	6.5dpf, whole brain of nr1d1:VNP fish
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain
GSE173972 (WT, ezh1+\|+)	embryo	baseline	1.25dpf, Kdrl-positive embryos
GSE173972 (HET, ezh1+\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
GSE173972 (KO, ezh1-\|-)	embryo	hematopoietic	1.25dpf, Kdrl-positive embryos
PRJNA640816 (2dpf)	embryo	baseline	2dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA640816 (2.9dpf)	embryo	baseline	2.9dpf, FACS isolated -4.9sox10:EGFP+ cells
PRJNA564810 (2dpf)	embryo	baseline	2dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development
PRJNA608912 (wt_unjuried)	heart	baseline	5mpf, wild type, uninjured
PRJNA608912 (wt_2dpi)	heart	regeneration	5mpf, wild type, 2 days post injury
PRJNA608912 (wt_7dpi)	heart	regeneration	5mpf, wild type, 7 days post injury
PRJNA608912 (wt_14dpi)	heart	regeneration	5mpf, wild type, 14 days post injury
PRJNA608912 (kit_uninjuried)	heart	regeneration	5mpf, kit mutant, uninjured
PRJNA608912 (kit_2dpi)	heart	regeneration	5mpf, kit mutant, 2 days post injury
PRJNA608912 (kit_7dpi)	heart	regeneration	5mpf, kit mutant, 7 days post injury
PRJNA608912 (kit_14dpi)	heart	regeneration	5mpf, kit mutant, 14 days post injury
PRJNA415636 (heart, blood)	heart, blood	baseline	adult, Zebrabow M, heart and blood
PRJNA754013 (zebrafish)	hypothalamus	baseline	adult, male, female, untreatment
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)
PRJNA641144 (P_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo primary tumors
PRJNA641144 (P_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo primary tumors
PRJNA641144 (M_INV)	tumor	disease	adult, ZMEL1-INV cells in vivo metastases
PRJNA641144 (M_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vivo metastases
PRJNA641144 (D_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vitro individual culture
PRJNA641144 (C_INV)	tumor	disease	adult, ZMEL1-INV cells in vitro co-culture
PRJNA641144 (C_PRO)	tumor	disease	adult, ZMEL1-PRO cells in vitro co-culture

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000056210

MARKER

EXPRESSION

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences