Fish Single-cell RNA Database

GENE ID: ENSDARG00000088872

Symbol	Location	Gene type	Genome version	Species
si:busm1-228j01.4	8: 44362452 ~ 44363596 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000088872 (si:busm1-228j01.4), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000007836	ctsla	5: 44804791 ~ 44810920 (+)
ENSDARG00000011701	ctsll	5: 24305877 ~ 24309667 (+)
ENSDARG00000070668	cd4-1	16: 11911897 ~ 11946139 (-)
ENSDARG00000074656	ctss2.1	16: 29509133 ~ 29513434 (+)
ENSDARG00000013771	ctss2.2	16: 29514473 ~ 29519977 (+)
ENSDARG00000043854	ppil4	20: 2982381 ~ 3004126 (-)
ENSDARG00000075932	si:ch73-211l2.3	8: 44475793 ~ 44480456 (+)
ENSDARG00000102612	slc15a4	8: 35809081 ~ 35960987 (-)
ENSDARG00000074816	si:zfos-367g9.1	8: 36354125 ~ 36362830 (+)
ENSDARG00000068286	slc7a4	8: 36500061 ~ 36515907 (+)
ENSDARG00000088872	si:busm1-228j01.4	8: 44362452 ~ 44363596 (-)
ENSDARG00000055120	ctsba	17: 32622931 ~ 32631514 (+)
ENSDARG00000009087	cd74a	14: 3038473 ~ 3052361 (+)
ENSDARG00000052855	ctso	14: 36752033 ~ 36763302 (-)
ENSDARG00000063095	ctsf	14: 7140997 ~ 7164646 (+)
ENSDARG00000039150	lgmn	13: 36037970 ~ 36050327 (-)
ENSDARG00000041108	ctsh	18: 26422124 ~ 26428525 (+)
ENSDARG00000095254	si:dkey-239j18.2	12: 16592408 ~ 16595406 (-)
ENSDARG00000039173	ctslb	12: 16617138 ~ 16619757 (-)
ENSDARG00000089806	si:dkey-239j18.3	12: 16634442 ~ 16636627 (-)
ENSDARG00000075527	zgc:174154	12: 16758972 ~ 16764751 (-)
ENSDARG00000095744	si:dkey-269i1.4	12: 16874645 ~ 16877136 (-)
ENSDARG00000094559	zgc:174855	12: 16938807 ~ 16941319 (-)
ENSDARG00000079376	zgc:174153	12: 16949391 ~ 16951851 (+)
ENSDARG00000036063	ppp1r11	19: 27448625 ~ 27453644 (+)
--	zgc:103599	--

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
	GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.