Fish Single-cell RNA Database

GENE ID: ENSDARG00000043085

Symbol	Location	Gene type	Genome version	Species
alox5b.1	15: 942531 ~ 952891 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000043085 (alox5b.1), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000006029	lta4h	4: 7653607 ~ 7673165 (-)
ENSDARG00000069463	alox12	7: 26029672 ~ 26047946 (+)
ENSDARG00000052148	ptgs1	5: 64900223 ~ 64946436 (+)
ENSDARG00000033355	zgc:101699	5: 1877464 ~ 1901838 (+)
ENSDARG00000045982	si:ch73-55i23.1	5: 1933131 ~ 1947624 (+)
ENSDARG00000004539	ptgs2a	2: 20916497 ~ 20923864 (-)
ENSDARG00000024546	pla2g4aa	2: 20925899 ~ 20957362 (+)
ENSDARG00000026548	cyp2u1	1: 49923402 ~ 49932040 (-)
ENSDARG00000010276	ptgs2b	20: 34121818 ~ 34127415 (-)
ENSDARG00000017141	pla2g4ab	20: 34129465 ~ 34148190 (+)
ENSDARG00000094057	cyp2j20	20: 25597527 ~ 25615802 (+)
ENSDARG00000042980	cyp2p7	20: 25568694 ~ 25615727 (+)
ENSDARG00000042982	cyp2p8	20: 25575391 ~ 25580002 (+)
ENSDARG00000009153	pla2g1b	8: 39724138 ~ 39733667 (+)
ENSDARG00000079745	si:ch211-166a6.5	8: 4445232 ~ 4508248 (-)
ENSDARG00000056535	pla2g4f.1	17: 21452258 ~ 21467430 (+)
ENSDARG00000070953	pla2g4f.2	17: 21477892 ~ 21494295 (+)
ENSDARG00000058246	cysltr1	14: 10450216 ~ 10462758 (+)
ENSDARG00000062598	ltc4s	14: 16370063 ~ 16379843 (-)
ENSDARG00000057273	alox5a	13: 18128275 ~ 18174864 (-)
ENSDARG00000026829	cotl1	18: 13203831 ~ 13216672 (+)
ENSDARG00000003077	gpx9	12: 45676667 ~ 45688953 (+)
ENSDARG00000043085	alox5b.1	15: 942531 ~ 952891 (-)
ENSDARG00000043089	alox5b.2	15: 963292 ~ 976353 (+)
ENSDARG00000091511	gpx7	23: 42219613 ~ 42232124 (-)
ENSDARG00000018146	gpx1a	11: 36048579 ~ 36156971 (-)
ENSDARG00000003259	loxa	10: 7738540 ~ 7756876 (-)
ENSDARG00000054755	alox5ap	10: 36458563 ~ 36463715 (+)
ENSDARG00000008948	pla2g3	10: 3520256 ~ 3532997 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
GSE106587 (WT)	embryo	baseline	12hpf, 6 somites, wild-type TLAB embryo	NA	NA	NA
GSE168695 (5dpf)	embryo	baseline	5dpf, GFP+ cells isolated from 5 dpf cldnb:lyn-EGFP embryos	NA	NA	NA
GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
GSE175929 (5mpf)	retina	baseline	5mpf, GFP-positive cells collected from two transgenic zebrafish, Tg(rho:EGFP)ja2Tg and Tg(gnat2:EGFP)ja23Tg	NA	NA	NA
PRJNA551501 (2mpf)	thyroid gland	baseline	2mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA
GSE131136 (all)	trunk, skin	baseline	5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone	NA	NA	NA
GSE176129 (pdgfrb-positive)	whole body	baseline	5dpf, FACS-isolated pdgfrb-positive cells	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA
GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000043085

EXPRESSION

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