Fish Single-cell RNA Database

GENE ID: ENSDARG00000088463

Symbol	Location	Gene type	Genome version	Species
NA	15: 47386939 ~ 47411807 (+)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000088463 (NA), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

Gene ID	Symbol	Location
ENSDARG00000010021	grpel1	7: 39744244 ~ 39751540 (-)
ENSDARG00000029063	clpxa	7: 13639473 ~ 13679937 (+)
ENSDARG00000004906	stip1	5: 66807179 ~ 66823794 (-)
ENSDARG00000098627	gspt1l	3: 36646054 ~ 36664310 (+)
ENSDARG00000102937	hspbp1	3: 13600714 ~ 13618382 (+)
ENSDARG00000020679	clpp	3: 34129505 ~ 34136778 (-)
ENSDARG00000099383	dnajb1a	3: 49150822 ~ 49163683 (-)
ENSDARG00000038978	dnajb4	2: 9552456 ~ 9560307 (+)
ENSDARG00000056167	hspe1	9: 32301017 ~ 32305007 (+)
ENSDARG00000056160	hspd1	9: 32286605 ~ 32300783 (-)
ENSDARG00000043417	eipr1	17: 51262556 ~ 51317306 (+)
ENSDARG00000003035	hspa9	14: 12142813 ~ 12168897 (+)
ENSDARG00000031929	stard14	14: 33270387 ~ 33278084 (-)
ENSDARG00000091748	tbx22	14: 9390850 ~ 9400556 (-)
ENSDARG00000018989	hspa4b	14: 23687678 ~ 23708159 (+)
ENSDARG00000031048	gspt1	12: 19362335 ~ 19383945 (+)
ENSDARG00000056532	serinc2	19: 15408363 ~ 15420718 (-)
ENSDARG00000104222	inppl1a	15: 47452630 ~ 47479119 (-)
ENSDARG00000088463	NA	15: 47386939 ~ 47411807 (+)
ENSDARG00000004187	zgc:122979	21: 5169154 ~ 5174054 (+)
ENSDARG00000069421	grpel2	21: 30410334 ~ 30415524 (-)
ENSDARG00000019941	sgta	11: 14771908 ~ 14813063 (-)
ENSDARG00000095594	NA	10: 16061655 ~ 16067194 (-)
ENSDARG00000016769	sgtb	10: 15381972 ~ 15405564 (-)
ENSDARG00000043157	dnajb13	10: 36673387 ~ 36682522 (-)
ENSDARG00000010145	tor4aa	10: 3322663 ~ 3332362 (-)
ENSDARG00000102295	dnaja3b	22: 25931782 ~ 25943267 (+)

EXPRESSION

Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
PRJNA415636 (brain)	brain	baseline	adult, Zebrabow M, brain	NA	NA	NA
PRJNA734348 (dome, control)	embryo	baseline	4.3hpf, dome, oocyte microinjection with Rhodamine B and control MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (dome, dnmt1)	embryo	growth	4.3hpf, dome, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA734348 (shield, dnmt1)	embryo	growth	6hpf, shield, oocyte microinjection with Rhodamine B and dnmt1 MO at oogenesis III stage (GV)	NA	NA	NA
PRJNA656271 (2dpf)	embryo	baseline	2dpf, FACS-isolated EGFP+ cells	NA	NA	NA
PRJNA564810 (1dpf)	embryo	baseline	1dpf, a single-cell transcriptome atlas for zebrafish development	NA	NA	NA
PRJNA415636 (pancreas, liver)	hepatopancreas	baseline	adult, Zebrabow M, pancreas and liver	NA	NA	NA
PRJNA605021 (supporting cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[Et(krt4:EGFP)sqgw57A] transgenic zebrafish larvae	NA	NA	NA
PRJNA605021 (hair cells)	neuromast	baseline	7dpf, posterior lateral-line neuromast cells were isolated from the dissociated trunks of Tg[myo6b:actb1-EGFP] transgenic zebrafish larvae	NA	NA	NA
PRJNA668529 (3d)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 days	NA	NA	NA
PRJNA668529 (3h)	olfactory rosette	disease	3mpf, intranasal 100ng r-Spike 3 hours	NA	NA	NA
PRJNA668529 (control)	olfactory rosette	baseline	3mpf, intranasal PBS	NA	NA	NA
PRJNA415636 (primary pancreatic islet)	primary pancreatic islet	baseline	adult, Zebrabow M, primary pancreatic islet	NA	NA	NA
PRJNA551501 (8mpf)	thyroid gland	baseline	8mpf, Tg(tg:mVenus-T2A-NTR)	NA	NA	NA

After clicking the magnifying glass button, the clustering and expression information will be displayed below.

species	Danio rerio
tissue	pituitary
cell type	Erythroid cells
gene	ENSDARG00000077809 il13
project	GSE158142
dataset	GSE158142 (20hpf)

GENE ID: ENSDARG00000088463

EXPRESSION

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