Fish Single-cell RNA Database

GENE ID: ENSDARG00000117593

Symbol	Location	Gene type	Genome version	Species
CT027832.1	10: 15082410 ~ 15086297 (-)	lincRNA	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

MARKER

The figure above shows the marker information in datasets of Danio rerio.
: marker.
: potential marker.
Click the legend to hide the icon of the cell type, which can be used in the case of overlapping icons.

EXPRESSION

	Dataset ID	Tissue / Organ	Experiment type	Sample	Cell type	Marker class	Evidence
	GSE161712 (M. marinum)	granulomas	disease	adult, infected with bacteria of M. marinum	Epithelialized macrophages (cluster: 12)	potential marker	NA
	GSE158142 (8dpf)	brain, eye	baseline	8dpf, untreatment
	GSE150498 (untreated ctrl)	intestine	baseline	6dpf, untreated ctrl
	GSE150498 (DSS treated)	intestine	disease	6dpf, DSS treated
	GSE159709 (melanoma)	tumor	disease	adult, equal numbers of sorted GFP+ (tumor) and GFP- (macroenvironment) cells
	GSE158099 (WT)	whole body	baseline	2.5dpf, cd41:GFPlow-WT
	GSE158099 (runx1 -\|-)	whole body	hematopoietic	2.5dpf, cd41:GFPlow-runx1-/-
	GSE158099 (runx1 -\|-)	whole body	hematopoietic	10dpf, cd41:GFPlow-runx1-/-
	GSE158099 (WT)	whole body	baseline	16dpf, cd41:GFPlow-WT
	GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-
	GSE158099 (runx1 -\|-)	whole body	hematopoietic	16dpf, cd41:GFPlow-runx1-/-

After clicking the magnifying glass button, the clustering and expression information will be displayed below.