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: marker.| Dataset ID | Tissue / Organ | Experiment type | Sample | Cell type | Marker class | Evidence | |
|---|---|---|---|---|---|---|---|
| GSE137784 (HCC, CreLox) | liver | disease | 6mpf, male, isolated from the zebrafish without HCC | ||||
| GSE122680 (1.5dpf) | retina | baseline | 1.5dpf, WT, untreatment |
Retinal progenitors (cluster: 1) |
potential marker |
NA |
|
| GSE122680 (3dpf) | retina | baseline | 3dpf, WT, untreatment |
Retinal progenitors (cluster: 1) |
potential marker |
NA |
|
| GSE122680 (14dpf) | retina | baseline | 14dpf, WT, untreatment |
Bipolar cells (cluster: 2) |
potential marker |
NA |
|
| GSE122680 (2dpf) | retina | baseline | 2dpf, WT, untreatment |
Retinal progenitors (cluster: 3) Retinal progenitors (cluster: 6) Retinal progenitors (cluster: 3) Retinal progenitors (cluster: 6) |
potential marker potential marker potential marker potential marker |
NA NA NA NA |
|
| GSE152982 (wild type) | trunk | baseline | 1.25dpf, untreatment |
Floor plate (cluster: 13) |
potential marker |
NA |
|
| GSE131136 (all) | trunk, skin | baseline | 5dpf, sox10:CRE positive cells from 5dpf and post-embryonic zebrafish trunks with and without thyroid hormone |
Satellite glia (cluster: 16) |
potential marker |
NA |
|
| GSE151354 (nkx3.2 mutant) | cartilage | growth | 21dpf, nkx3.2 mutant | ||||
| GSE144944 (fgfr3 +|+) | cranial vault | baseline | 1mpf, fgfr3 +/+ | ||||
| GSE144944 (fgfr3 -|-) | cranial vault | growth | 1mpf, fgfr3 -/- | ||||
| GSE130526 (fin) | dorsal and anal fin | baseline | adult, fins were amputated from fish expressing both pnp4a:palmmCherry and tyrp1b:palmmCherry | ||||
| GSE158849 (labeled) | embryo | baseline | 6hpf, WT, 4sUTP injected (labeled) | ||||
| GSE126647 (control) | embryo | baseline | 1.17dpf, control nkx2.5:ZsYellow+ cells | ||||
| GSE126647 (Pbx4-depleted) | embryo | growth | 1.17dpf, Pbx4-depleted nkx2.5:ZsYellow+ cells | ||||
| GSE150498 (untreated ctrl) | intestine | baseline | 6dpf, untreated ctrl | ||||
| GSE150498 (DSS treated) | intestine | disease | 6dpf, DSS treated | ||||
| GSE137784 (HCC, HepABC) | liver | disease | 6mpf, male, isolated from the Tg(fabp10a:pt-B-cat)(HepABC) zebrafish with HCC | ||||
| GSE137784 (no HCC) | liver | baseline | 6mpf, male, isolated from the CreLox zebrafish with HCC | ||||
| GSE148591 (6mpf) | pituitary | baseline | 6mpf, male, Sox17:CreERT2 | ||||
| GSE148591 (3mpf) | pituitary | transplant | 3mpf, graft transplantation during early embryogenesis | ||||
| GSE122680 (24hpf) | retina | baseline | 24hpf, WT, untreatment |