Fish Spatial Expression Database

GENE ID: ENSDARG00000078494

Symbol	Location	Gene type	Genome version	Species
adamts14	12: 47967761 ~ 48006835 (-)	protein_coding	GRCz11	Danio rerio

Notice the +/- strand.
Display format: symbol/gene id: RNA id. (Except when gene id is similar to RNA id.)
You can browse transcripts by dragging.
A more detailed transcript can be viewed by the zoom button in the upper right corner.
Click on the transcript to obtain the sequence.

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000078494 (adamts14), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000052061	col4a6	7: 50920437 ~ 51102479 (-)
ENSDARG00000030394	prf1.1	3: 30980852 ~ 30988333 (+)
ENSDARG00000012405	col1a1a	3: 23221047 ~ 23239458 (+)
ENSDARG00000053953	myadml2	3: 57991074 ~ 57991985 (+)
ENSDARG00000021720	col7a1	6: 40184235 ~ 40312091 (-)
ENSDARG00000009014	col11a1b	2: 15389193 ~ 15563194 (-)
ENSDARG00000031678	col5a2a	9: 42653188 ~ 42696408 (-)
ENSDARG00000045175	pofut2	9: 40851088 ~ 40873934 (-)
ENSDARG00000043667	zgc:100997	20: 10498704 ~ 10520821 (+)
ENSDARG00000014953	cnih3	20: 36233873 ~ 36298140 (+)
ENSDARG00000028071	bmp1a	8: 51165392 ~ 51293301 (-)
ENSDARG00000096867	clmn	17: 15983247 ~ 16034453 (+)
ENSDARG00000039352	pald1b	13: 30169233 ~ 30214368 (+)
ENSDARG00000020311	cnih1	13: 36592194 ~ 36606941 (+)
ENSDARG00000096073	col19a1	13: 38814521 ~ 38856156 (+)
ENSDARG00000076163	col19a1	13: 38990939 ~ 39115963 (+)
ENSDARG00000061375	sgpl1	13: 25725547 ~ 25750910 (-)
ENSDARG00000035809	col1a1b	12: 3095699 ~ 3133483 (-)
ENSDARG00000078494	adamts14	12: 47967761 ~ 48006835 (-)
ENSDARG00000067831	tbata	12: 47907277 ~ 47929058 (+)
ENSDARG00000020007	col1a2	19: 40983221 ~ 41002980 (+)
ENSDARG00000024492	col9a2	19: 38422059 ~ 38467554 (+)
ENSDARG00000012422	col11a2	19: 7179740 ~ 7225206 (-)
ENSDARG00000073917	b3glcta	15: 31590224 ~ 31732799 (+)
ENSDARG00000002831	col4a4	15: 35951888 ~ 36055401 (-)
ENSDARG00000037845	col9a3	23: 495514 ~ 524780 (-)
ENSDARG00000011407	col2a1b	11: 32007 ~ 55224 (-)
ENSDARG00000053865	NA	--
ENSDARG00000078899	NA	--
ENSDARG00000087488	NA	--
ENSDARG00000088618	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

one-cell stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE158849 (embryo replicate1)	embryo	baseline	one-cell stage, 0.3hpf, untreatment	GSM4812175	GSE158849
	GSE158849 (embryo replicate3)	embryo	baseline	one-cell stage, 0.3hpf, untreatment	GSM4812177	GSE158849

shield stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (shield, L to R)	embryo	baseline	shield stage, intact embryo, sectioned from left to right	GSM1448798	GSE59873
	GSE59873 (shield, D to V, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from dorsal to ventral end, replicate	GSM1448802	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000078494

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.