Fish Spatial Expression Database

GENE ID: ENSDARG00000052425

Symbol	Location	Gene type	Genome version	Species
--	--	--	GRCz11	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000052425 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000035942	hrh3	7: 41748693 ~ 41753237 (+)
ENSDARG00000016141	slc6a2	7: 35348471 ~ 35380186 (-)
ENSDARG00000069459	si:dkey-6n21.13	7: 26058772 ~ 26061610 (+)
ENSDARG00000059883	trpv1	5: 42136359 ~ 42158556 (+)
ENSDARG00000011487	gnaq	5: 55588389 ~ 55600689 (-)
ENSDARG00000035178	gna14	5: 55543580 ~ 55560937 (-)
ENSDARG00000053326	gna11b	2: 52469854 ~ 52550135 (-)
ENSDARG00000012796	hnmt	9: 10138196 ~ 10145880 (-)
ENSDARG00000031600	rd3	20: 13969414 ~ 13997835 (+)
ENSDARG00000094237	taar12h	20: 46052685 ~ 46053720 (-)
ENSDARG00000086268	taar12i	20: 46113445 ~ 46114467 (-)
ENSDARG00000020594	txlnba	20: 36845787 ~ 36887516 (-)
ENSDARG00000043403	paox1	8: 15239549 ~ 15250265 (+)
ENSDARG00000091277	adra2da	14: 790166 ~ 792959 (+)
ENSDARG00000075454	hdc	18: 73434 ~ 81280 (-)
ENSDARG00000089486	cplx3b	18: 5677508 ~ 5692292 (-)
ENSDARG00000025478	gipr	15: 28940352 ~ 28974120 (+)
ENSDARG00000031649	cort	23: 28731379 ~ 28732313 (+)
ENSDARG00000054667	adra2db	21: 32820175 ~ 32821422 (+)
ENSDARG00000089564	NA	11: 22109887 ~ 22169026 (+)
ENSDARG00000057479	hrh2b	10: 21899753 ~ 21909696 (+)
ENSDARG00000093266	taar19o	10: 40756352 ~ 40757389 (+)
ENSDARG00000062934	gpr12	24: 21584074 ~ 21588914 (-)
ENSDARG00000010002	gna11a	22: 21852070 ~ 21897279 (-)
ENSDARG00000071416	gna15.4	22: 21950838 ~ 21957192 (+)
ENSDARG00000016364	gna15.1	22: 22021936 ~ 22036307 (+)
ENSDARG00000062508	cplx3a	25: 20577890 ~ 20581480 (-)
ENSDARG00000052425	NA	--
ENSDARG00000075688	NA	--
ENSDARG00000057111	NA	--
ENSDARG00000069201	NA	--
ENSDARG00000092171	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

one-cell stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE158849 (embryo replicate2)	embryo	baseline	one-cell stage, 0.3hpf, untreatment	GSM4812176	GSE158849

10 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (10 somite, P to A)	embryo	baseline	10 somite stage, intact embryo, sectioned from posterior to anterior end	GSM1448805	GSE59873
	GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873

15 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000052425

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.