Fish Spatial Expression Database

GENE ID: ENSDARG00000038131

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000038131 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000016526	gata3	4: 25054510 ~ 25064510 (-)
ENSDARG00000029830	myf6	4: 21717793 ~ 21720943 (+)
ENSDARG00000075017	myzap	7: 52389958 ~ 52417777 (-)
ENSDARG00000075867	mrtfaa	3: 24708685 ~ 24765127 (+)
ENSDARG00000037872	foxk1	3: 40901743 ~ 40933415 (-)
ENSDARG00000076867	mrtfbb	3: 46271911 ~ 46365456 (+)
ENSDARG00000009094	gata2b	6: 40794015 ~ 40803800 (+)
ENSDARG00000033971	prrx1a	2: 23165250 ~ 23172708 (-)
ENSDARG00000088881	si:dkeyp-69b9.3	16: 13505064 ~ 13516745 (-)
ENSDARG00000042027	prrx1b	20: 34511678 ~ 34521041 (+)
ENSDARG00000078280	nkx3-1	8: 50256930 ~ 50259448 (-)
ENSDARG00000078066	elk1	8: 8712446 ~ 8744898 (+)
ENSDARG00000052960	nppa	8: 48613040 ~ 48617664 (+)
ENSDARG00000070769	foxg1a	17: 29117027 ~ 29119362 (-)
ENSDARG00000018004	nkx2.5	14: 24241241 ~ 24244034 (+)
ENSDARG00000071497	zic3	14: 32011689 ~ 32016615 (-)
ENSDARG00000089368	hopx	14: 1170968 ~ 1178359 (+)
ENSDARG00000039095	nkx2.3	13: 40409215 ~ 40411917 (-)
ENSDARG00000070053	foxg1d	13: 255067 ~ 257821 (+)
ENSDARG00000088307	mrtfba	12: 19976400 ~ 20045101 (+)
ENSDARG00000076229	mrtfab	12: 18718065 ~ 18787459 (+)
ENSDARG00000030583	foxk2	12: 32370 ~ 42214 (-)
ENSDARG00000061818	meox2b	19: 31183495 ~ 31197780 (+)
ENSDARG00000040911	meox2a	15: 34428308 ~ 34468599 (-)
ENSDARG00000075713	shox2	15: 2182103 ~ 2188422 (-)
ENSDARG00000025522	sgk1	23: 31640239 ~ 31693309 (-)
ENSDARG00000077092	elk4	11: 38470545 ~ 38492564 (-)
ENSDARG00000009438	myog	11: 22592935 ~ 22605981 (-)
ENSDARG00000053918	srfa	22: 35089031 ~ 35124655 (+)
ENSDARG00000030110	myod1	25: 31421253 ~ 31423493 (-)
ENSDARG00000035831	NA	--
ENSDARG00000041204	NA	--
ENSDARG00000076267	NA	--
ENSDARG00000035759	NA	--
ENSDARG00000038131	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

shield stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (shield, V to A, replicate)	embryo	baseline	shield stage, intact embryo, sectioned from vegetal to animal pole, replicate	GSM1448797	GSE59873

10 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (10 somite, A to P)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448803	GSE59873
GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873
GSE59873 (10 somite, V to D)	embryo	baseline	10 somite stage, intact embryo, sectioned from ventral to dorsal end	GSM1448806	GSE59873
GSE59873 (10 somite, D to V)	embryo	baseline	10 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448807	GSE59873
GSE59873 (10 somite, L to R)	embryo	baseline	10 somite stage, intact embryo, sectioned from left to right	GSM1448808	GSE59873
GSE59873 (10 somite, R to L)	embryo	baseline	10 somite stage, intact embryo, sectioned from right to left	GSM1448809	GSE59873

15 somite stage

Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
GSE59873 (15 somite, A to P)	embryo	baseline	15 somite stage, intact embryo, sectioned from anterior to posterior end	GSM1448810	GSE59873
GSE59873 (15 somite, D to V)	embryo	baseline	15 somite stage, intact embryo, sectioned from dorsal to ventral end	GSM1448813	GSE59873
GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873
GSE59873 (15 somite, H to T)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned head to tail	GSM1448816	GSE59873
GSE59873 (15 somite, T to H, replicate)	embryo	baseline	15 somite stage, deyolked embryo, straightened, sectioned tail to head, replicate	GSM1448819	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

After clicking the magnifying glass button, the expression information will be displayed below.

GENE ID: ENSDARG00000038131

Function

Expression

The folded tree shows the stages of samples in datasets covered by the FishSED. Click on the node of the fold tree to browse the details of the dataset. Check the dataset checkbox for dataset selection for expression profile visualization.

copyright 2021-present@Lab of Aquatic Bioinfomatics, Institute of Hydrobiology, Chinese Academy of Sciences

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.