Fish Spatial Expression Database

GENE ID: ENSDARG00000040599

Symbol	Location	Gene type	Genome version	Species
--	--	--	Zv9	Danio rerio

Function

PPI (protein-protein interaction) results are shown above.

Green is ENSDARG00000040599 (--), yellow represents other genes.

Hover over the node can see the symbol/gene ID it represents.

The more connections, the bigger symbol size.

GO/KEGG annotations of these genes are shown on the right.

Gene ID	Symbol	Location
ENSDARG00000091970	ms4a17a.3	4: 76722754 ~ 76728540 (+)
ENSDARG00000095695	ms4a17a.10	4: 76745015 ~ 76751266 (+)
ENSDARG00000053563	ms4a17a.12	4: 76755294 ~ 76774721 (+)
ENSDARG00000034173	prkcq	4: 25410293 ~ 25441127 (+)
ENSDARG00000094809	ms4a17a.11	4: 76575585 ~ 76588333 (+)
ENSDARG00000093987	si:ch211-165f21.7	7: 5833060 ~ 5864185 (-)
ENSDARG00000102230	si:ch211-8c17.3	3: 12835370 ~ 12837643 (+)
ENSDARG00000006468	grap2a	3: 29445473 ~ 29468859 (+)
ENSDARG00000103678	si:ch211-215e19.4	2: 51273795 ~ 51275873 (-)
ENSDARG00000088556	si:dkey-1c7.2	1: 57774454 ~ 57779848 (+)
ENSDARG00000088019	si:ch211-114l13.12	1: 57981823 ~ 57991025 (+)
ENSDARG00000096933	si:ch211-135n15.2	16: 42772678 ~ 42781773 (+)
ENSDARG00000089399	tmem176l.2	16: 46639772 ~ 46645396 (-)
ENSDARG00000017565	itk	14: 34045284 ~ 34074510 (-)
ENSDARG00000045089	si:ch211-270n8.1	13: 20379392 ~ 20381485 (-)
ENSDARG00000015065	c4	15: 32351886 ~ 32383529 (-)
ENSDARG00000019772	si:ch1073-280e3.1	15: 478524 ~ 496549 (+)
ENSDARG00000015068	txk	23: 44049509 ~ 44060455 (+)
ENSDARG00000005616	bfb	21: 27437867 ~ 27443995 (-)
ENSDARG00000055955	lcp2a	21: 30306369 ~ 30347592 (+)
ENSDARG00000055278	cfb	21: 27416284 ~ 27431397 (+)
ENSDARG00000097702	si:ch1073-66l23.1	24: 38522254 ~ 38528645 (+)
ENSDARG00000071463	zgc:154125	24: 38534550 ~ 38545290 (+)
ENSDARG00000094699	NA	--
ENSDARG00000095520	NA	--
ENSDARG00000040599	NA	--
ENSDARG00000086680	NA	--
ENSDARG00000095419	NA	--

Expression

Tomo-seq

The folded tree shows the stages of samples in datasets covered by the FishSED.

Click on the node of the fold tree to browse the details of the dataset.

Check the dataset checkbox for dataset selection for expression profile visualization.

10 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (10 somite, A to P, replicate)	embryo	baseline	10 somite stage, intact embryo, sectioned from anterior to posterior end, replicate	GSM1448804	GSE59873

15 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (15 somite, R to L)	embryo	baseline	15 somite stage, intact embryo, sectioned from right to left	GSM1448815	GSE59873

18 somite stage

	Dataset ID	Tissue / organ	Experiment type	Sample description	Source dataset ID	Project ID
	GSE59873 (18 somite, T to H)	embryo	baseline	18 somite stage, deyolked embryo, head removed, straightened, sectioned tail to head	GSM1448820	GSE59873

After clicking the magnifying glass button, the expression information will be displayed below.